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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7496826  carbonic anhydrase 2 
 ppo-r.4  7496826  carbonic anhydrase 2 
 ppo-m.4  7496826  carbonic anhydrase 2 
 ppo-u.5  7453765  carbonic anhydrase 2 
 ppo-u.5  7468858  beta carbonic anhydrase 5, chloroplastic 
 gma-u.5  100807954  beta carbonic anhydrase 5, chloroplastic 
 gma-u.5  100795969  carbonic anhydrase 2 
 gma-u.5  100782859  beta carbonic anhydrase 5, chloroplastic 
 mtr-u.5  11428425  carbonic anhydrase, chloroplastic 
 mtr-u.5  11429026  carbonic anhydrase 2 
 mtr-u.5  11432684  carbonic anhydrase 2 
 ath-u.5  BCA3  beta carbonic anhydrase 3 
 ath-u.5  CA1  carbonic anhydrase 1 
 ath-u.5  BCA5  beta carbonic anhydrase 5 
 vvi-u.5  100852632  carbonic anhydrase 2 
 sly-u.5  ca2  carbonic anhydrase 
 sly-u.5  101257401  beta carbonic anhydrase 5, chloroplastic 
 sly-u.5  543802  carbonic anhydrase 2 
 osa-u.5  4326583  carbonic anhydrase, chloroplastic 
 osa-u.5  4347305  beta carbonic anhydrase 5, chloroplastic 
 osa-u.5  9266472  carbonic anhydrase, chloroplastic 
 zma-u.5  100382491  carbonic anhydrase6 
 zma-u.5  100275493  carbonic anhydrase 
 zma-u.5  100274597  carbonic anhydrase 

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Top 50 coexpressed genes to 7496826 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496826 (ppo-u.5 coexpression data)

CoexMap"7496826"


ppoLOC7496826 | Entrez gene ID : 7496826
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 1 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00910 [list] [network] Nitrogen metabolism (45 genes)
GO BP
GO:0015976 [list] [network] carbon utilization  (7 genes)  IEA  
GO CC
GO MF
GO:0004089 [list] [network] carbonate dehydratase activity  (16 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_002298524.3 [sequence] [blastp]
XP_024459244.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_002298524.3)
chlo 9  (predict for XP_024459244.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002298524.3)
chlo 9  (predict for XP_024459244.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7496826

.

ppo-r.4
for
7496826

.

ppo-m.4
for
7496826

.

ppo-u.5
for
7453765

.

ppo-u.5
for
7468858

.

gma-u.5
for
100807954

.

gma-u.5
for
100795969

.

gma-u.5
for
100782859

.

mtr-u.5
for
11428425

.

mtr-u.5
for
11429026

.

mtr-u.5
for
11432684

.

ath-u.5
for
BCA3

.

ath-u.5
for
CA1

.

ath-u.5
for
BCA5

.

vvi-u.5
for
100852632

.

sly-u.5
for
ca2

.

sly-u.5
for
101257401

.

sly-u.5
for
543802

.

osa-u.5
for
4326583

.

osa-u.5
for
4347305

.

osa-u.5
for
9266472

.

zma-u.5
for
100382491

.

zma-u.5
for
100275493

.

zma-u.5
for
100274597

.


Ortholog ID: 333
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre cre sbi sot sot cit cit bdi bdi nta nta
Symbol BCA5 BCA3 LOC100810496 LOC100782859 ca3 LOC543802 LOC9266472 LOC4347305 LOC100382491 LOC100275493 LOC103870985 LOC103829262 LOC100249137 LOC7468858 LOC7453765 LOC11407419 LOC11428425 LOC123104020 LOC123411871 LOC121224462 LOC107909667 LOC106429957 LOC106361095 CHLRE_09g405750v5 CHLRE_13g607350v5 LOC110432850 LOC102591490 LOC102604042 LOC102624289 LOC102614650 LOC100834132 LOC104582824 LOC107761423 LOC107761427
Function* beta carbonic anhydrase 5 beta carbonic anhydrase 3 carbonic anhydrase beta carbonic anhydrase 5, chloroplastic carbonic anhydrase carbonic anhydrase 2 carbonic anhydrase, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase6 carbonic anhydrase beta carbonic anhydrase 1, chloroplastic beta carbonic anhydrase 3 beta carbonic anhydrase 1, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase 2 carbonic anhydrase 2 carbonic anhydrase, chloroplastic beta carbonic anhydrase 5, chloroplastic carbonic anhydrase, chloroplastic-like carbonic anhydrase 2 carbonic anhydrase 2 beta carbonic anhydrase 2, chloroplastic beta carbonic anhydrase 5, chloroplastic uncharacterized protein uncharacterized protein beta carbonic anhydrase 5, chloroplastic-like carbonic anhydrase, chloroplastic carbonic anhydrase 2 beta carbonic anhydrase 5, chloroplastic-like carbonic anhydrase 2 beta carbonic anhydrase 5, chloroplastic carbonic anhydrase, chloroplastic carbonic anhydrase 2 carbonic anhydrase 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 9
ath01200 Carbon metabolism 9
ath00061 Fatty acid biosynthesis 8
ath00010 Glycolysis / Gluconeogenesis 7
ath01212 Fatty acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00270 Cysteine and methionine metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00053 Ascorbate and aldarate metabolism 2
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa04146 Peroxisome 2
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01200 Carbon metabolism 4
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 3
zma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma00620 Pyruvate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00910 Nitrogen metabolism 3
bra00010 Glycolysis / Gluconeogenesis 3
bra00710 Carbon fixation by Calvin cycle 3
bra01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr00430 Taurine and hypotaurine metabolism 2
mtr00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 9
tae00071 Fatty acid degradation 6
tae00310 Lysine degradation 6
tae00010 Glycolysis / Gluconeogenesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 4
hvu00010 Glycolysis / Gluconeogenesis 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 2
hvu00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00910 Nitrogen metabolism 2
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
cre00030 Pentose phosphate pathway 2
cre00480 Glutathione metabolism 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 2
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi00710 Carbon fixation by Calvin cycle 4
bdi01200 Carbon metabolism 4
bdi00195 Photosynthesis 3
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829498 838983 100810496 100782859 100147727 543802 9266472 4347305 100382491 100275493 103870985 103829262 100249137 7468858 7453765 11407419 11428425 123104020 123411871 121224462 107909667 106429957 106361095 5723211 5724648 110432850 102591490 102604042 102624289 102614650 100834132 104582824 107761423 107761427
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