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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7496965   F-box/kelch-repeat protein SKIP4 
 ppo-r.4   7496965   F-box/kelch-repeat protein SKIP4 
 ppo-m.4   7496965   F-box/kelch-repeat protein SKIP4 
 gma-u.5   100798211   F-box/kelch-repeat protein SKIP4 
 mtr-u.5   25500884   F-box/kelch-repeat protein SKIP4 
 ath-u.5   SKIP4   SKP1 interacting partner 4 
 vvi-u.5   100253406   F-box/kelch-repeat protein SKIP4 
 sly-u.5   101264155   F-box/kelch-repeat protein SKIP4 
 osa-u.5   4328063   F-box/kelch-repeat protein SKIP4 
 zma-u.5   100501379   F-box/kelch-repeat protein SKIP4 

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Top 50 coexpressed genes to 7496965 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496965 (ppo-u.5 coexpression data)

CoexMap"7496965"


ppoLOC7496965 | Entrez gene ID : 7496965    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002320790.1 [sequence] [blastp]
XP_024441626.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  nucl 1,  mito 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for XP_002320790.1)
chlo 4,  cyto 2,  nucl 1,  mito 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for XP_024441626.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002320790.1)
other 7  (predict for XP_024441626.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7496965

.
ppo-r.4
for
7496965

.
ppo-m.4
for
7496965

.
gma-u.5
for
100798211

.
mtr-u.5
for
25500884

.
ath-u.5
for
SKIP4

.
vvi-u.5
for
100253406

.
sly-u.5
for
101264155

.
osa-u.5
for
4328063

.
zma-u.5
for
100501379

.


Ortholog ID: 7633
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol SKIP4 LOC100798211 LOC101264155 LOC4328063 LOC100501379 LOC103830293 LOC100253406 LOC7496965 LOC25500884 LOC123131737 LOC123135590 LOC123401519 LOC107943224 LOC107923534 LOC106353265 LOC106432701 LOC8068217 LOC102591056 LOC102621529 LOC127901025 LOC100834327 LOC107789419 LOC107769598
Function* SKP1 interacting partner 4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4-like F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4-like F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4-like F-box/kelch-repeat protein SKIP4 F-box/kelch-repeat protein SKIP4-like F-box/kelch-repeat protein SKIP4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 3
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 2
bna04148 Efferocytosis 2
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi00510 N-Glycan biosynthesis 3
bdi00513 Various types of N-glycan biosynthesis 3
bdi03060 Protein export 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 10
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta00062 Fatty acid elongation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825307 100798211 101264155 4328063 100501379 103830293 100253406 7496965 25500884 123131737 123135590 123401519 107943224 107923534 106353265 106432701 8068217 102591056 102621529 127901025 100834327 107789419 107769598
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