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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   MADS-RIN-MADS-MC   MADS-box transcription factor MADS-rin 
 sly-r.6   MADS-RIN-MADS-MC   MADS-box transcription factor MADS-rin 

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Top 50 coexpressed genes to MADS-RIN-MADS-MC (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MADS-RIN-MADS-MC (sly-u.5 coexpression data)

CoexMap"778278"


slyMADS-RIN-MADS-MC | Entrez gene ID : 778278    
Species sly osa zma bna ghi gma sbi nta mtr cre bra cit vvi ppo hvu bdi sot tae ath
Paralog 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (133 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (282 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (326 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (499 genes)  IEA  
Protein NP_001233976.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001233976.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001233976.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target

sly-u.5
for
MADS-RIN-MADS-MC

.
sly-r.6
for
MADS-RIN-MADS-MC

.


Ortholog ID: 36762
Species sly
Symbol MADS-RIN-MADS-MC
Function* MADS-box transcription factor MADS-rin
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern
Entrez Gene ID* 778278
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