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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   CIP6   CONSTANS interacting protein 6 
 sly-r.6   CIP6   CONSTANS interacting protein 6 
 sly-u.5   101247126   OBERON-like protein 
 ath-u.5   OBE1   potyvirus VPg interacting protein (DUF1423) 
 ath-u.5   OBE2   potyvirus VPg interacting protein (DUF1423) 
 gma-u.5   100818964   OBERON-like protein 
 gma-u.5   100803870   OBERON-like protein 
 gma-u.5   100795450   OBERON-like protein 
 vvi-u.5   100259651   OBERON-like protein 
 ppo-u.5   7455992   OBERON-like protein 
 ppo-u.5   7489859   OBERON-like protein 
 mtr-u.5   11430922   OBERON-like protein 
 osa-u.5   4352338   OBERON-like protein 
 zma-u.5   100281506   potyvirus VPg interacting protein 
 zma-u.5   100272719   uncharacterized LOC100272719 

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Top 50 coexpressed genes to CIP6 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CIP6 (sly-u.5 coexpression data)

CoexMap"778335"


slyCIP6 | Entrez gene ID : 778335      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 3 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010071 [list] [network] root meristem specification  (6 genes)  IEA  
GO:0010078 [list] [network] maintenance of root meristem identity  (6 genes)  IEA  
GO:0010492 [list] [network] maintenance of shoot apical meristem identity  (6 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (1953 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein NP_001333925.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001333925.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001333925.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
CIP6

.
sly-r.6
for
CIP6

.
sly-u.5
for
101247126

.
ath-u.5
for
OBE1

.
ath-u.5
for
OBE2

.
gma-u.5
for
100818964

.
gma-u.5
for
100803870

.
gma-u.5
for
100795450

.
vvi-u.5
for
100259651

.
ppo-u.5
for
7455992

.
ppo-u.5
for
7489859

.
mtr-u.5
for
11430922

.
osa-u.5
for
4352338

.
zma-u.5
for
100281506

.
zma-u.5
for
100272719

.


Ortholog ID: 4539
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol OBE1 OBE2 LOC100818964 LOC100803870 CIP6 LOC101247126 LOC4352338 LOC100272719 LOC100281506 LOC103837240 LOC103849086 LOC100259651 LOC7489859 LOC7455992 LOC11430922 LOC123119887 LOC123091582 LOC123399192 LOC107954950 LOC107956258 LOC106427956 LOC125587768 LOC8079153 LOC110434652 LOC102590088 LOC102591637 LOC102611436 LOC100821045 LOC100839734 LOC107779666 LOC107803747
Function* potyvirus VPg interacting protein (DUF1423) potyvirus VPg interacting protein (DUF1423) OBERON-like protein OBERON-like protein CONSTANS interacting protein 6 OBERON-like protein OBERON-like protein uncharacterized LOC100272719 potyvirus VPg interacting protein protein OBERON 2 protein OBERON 1 OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein protein OBERON 1 protein OBERON 1 OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein OBERON-like protein protein OBERON 2 OBERON-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03013 Nucleocytoplasmic transport 5
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819969 834868 100818964 100803870 778335 101247126 4352338 100272719 100281506 103837240 103849086 100259651 7489859 7455992 11430922 123119887 123091582 123399192 107954950 107956258 106427956 125587768 8079153 110434652 102590088 102591637 102611436 100821045 100839734 107779666 107803747
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