ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	778383	NAC domain-containing protein 1
tae-r.2	123187447	NAC domain-containing protein 2
tae-r.2	123184704	protein ATAF2
tae-r.2	123135738	NAC domain-containing protein 67
hvu-r.1	123452952	NAC domain-containing protein 2-like
hvu-r.1	123446515	NAC domain-containing protein 1-like
hvu-r.1	123395732	NAC transcription factor 29-like
bdi-r.1	100831889	NAC domain-containing protein 67
bdi-r.1	100834178	NAC domain-containing protein 68
bdi-r.1	100835143	NAC transcription factor NAM-B1
osa-u.5	4349648	NAC transcription factor 29
osa-u.5	9266867	NAC domain-containing protein 58-like
osa-u.5	4327485	NAC domain-containing protein 68-like
zma-u.5	100273749	uncharacterized LOC100273749
zma-u.5	100280247	uncharacterized LOC100280247
zma-u.5	100285247	uncharacterized LOC100285247
sbi-r.1	8069118	NAC domain-containing protein 67
sbi-r.1	8072366	NAC transcription factor NAM-B2
sbi-r.1	8078572	NAC domain-containing protein 102
ath-u.5	NAP	NAC-like, activated by AP3/PI
gma-u.5	NAC26	NAC domain protein
gma-u.5	NAC51	transcription factor NAC51
gma-u.5	NAC1	NAC domain protein NAC1
sly-u.5	101244243	NAC transcription factor 32-like
sly-u.5	NAP1	NAC domain-containing protein 1
sly-u.5	NAP2	NAC domain-containing protein 2
bra-r.6	NAP	NAC transcription factor 29
bra-r.6	103831344	NAC transcription factor 29
vvi-u.5	104879728	NAC transcription factor 29
vvi-u.5	100263939	NAC domain-containing protein 68
ppo-u.5	7498182	NAC domain-containing protein 2
mtr-u.5	11420119	NAC domain-containing protein 2
mtr-u.5	11445056	NAC domain-containing protein 1
ghi-r.1	107887374	NAC transcription factor 29-like
ghi-r.1	107946409	NAC transcription factor 29
ghi-r.1	107918768	NAC transcription factor 29
bna-r.1	106402938	NAC transcription factor 29
bna-r.1	106353830	NAC transcription factor 29
bna-r.1	106354073	NAC transcription factor 29-like
sot-r.1	102591523	NAC transcription factor 29-like
sot-r.1	NAC2	NAC transcription factor 29-like
cit-r.1	102608057	NAC transcription factor 29
nta-r.1	107775833	NAC domain-containing protein 1-like
nta-r.1	107781532	NAC domain-containing protein 1

Top 50 coexpressed genes to 778383 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 778383 (tae-r.2 coexpression data)

CoexMap"778383"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(5253 genes)

IEA

GO CC

GO MF

GO:0003677 [list] [network] DNA binding

(6662 genes)

IEA

Protein

XP_044380558.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 2

(predict for XP_044380558.1)

Subcellular
localization
TargetP

other 5

(predict for XP_044380558.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 778383	tae-r.2 for 123187447	tae-r.2 for 123184704	tae-r.2 for 123135738	hvu-r.1 for 123452952	hvu-r.1 for 123446515	hvu-r.1 for 123395732	bdi-r.1 for 100831889	bdi-r.1 for 100834178	bdi-r.1 for 100835143	osa-u.5 for 4349648	osa-u.5 for 9266867	osa-u.5 for 4327485	zma-u.5 for 100273749	zma-u.5 for 100280247	zma-u.5 for 100285247	sbi-r.1 for 8069118	sbi-r.1 for 8072366	sbi-r.1 for 8078572	ath-u.5 for NAP	gma-u.5 for NAC26	gma-u.5 for NAC51	gma-u.5 for NAC1	sly-u.5 for 101244243	sly-u.5 for NAP1	sly-u.5 for NAP2	bra-r.6 for NAP	bra-r.6 for 103831344	vvi-u.5 for 104879728	vvi-u.5 for 100263939	ppo-u.5 for 7498182	mtr-u.5 for 11420119	mtr-u.5 for 11445056	ghi-r.1 for 107887374	ghi-r.1 for 107946409	ghi-r.1 for 107918768	bna-r.1 for 106402938	bna-r.1 for 106353830	bna-r.1 for 106354073	sot-r.1 for 102591523	sot-r.1 for NAC2	cit-r.1 for 102608057	nta-r.1 for 107775833	nta-r.1 for 107781532

Ortholog

Ortholog ID: 887

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NAP

NAC51

NAC1

NAP2

NAP

NAC2

Function^*

NAC transcription factor 29

NAC domain-containing protein 2

NAC domain-containing protein 68

NAC domain-containing protein 2-like

NAC transcription factor NAM-B1

NAC domain-containing protein 18

NAC domain-containing protein 68-like

NAC domain-containing protein 58-like

NAC transcription factor 29

uncharacterized LOC100273749

uncharacterized LOC100285247

NAC transcription factor NAM-B2

NAC transcription factor 29

NAC transcription factor 25

NAC transcription factor 29

NAC-like, activated by AP3/PI

transcription factor NAC51

NAC domain protein NAC1

NAC domain-containing protein 2

NAC transcription factor 32-like

NAC domain-containing protein 2

NAC domain-containing protein 2-like

NAC transcription factor 29

NAC domain-containing protein 68

NAC domain-containing protein 2

NAC domain-containing protein 1

NAC transcription factor 29-like

NAC transcription factor 29

NAC transcription factor 29-like

NAC transcription factor 29

NAC domain-containing protein 1-like

NAC domain-containing protein 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00250	Alanine, aspartate and glutamate metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	2
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	4
osa04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00630	Glyoxylate and dicarboxylate metabolism	2
osa01200	Carbon metabolism	2
osa00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00630	Glyoxylate and dicarboxylate metabolism	3
gma01200	Carbon metabolism	3
gma01240	Biosynthesis of cofactors	2
gma00640	Propanoate metabolism	2
gma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
mtr00350	Tyrosine metabolism	4
mtr00360	Phenylalanine metabolism	4
mtr01240	Biosynthesis of cofactors	4
mtr00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00250	Alanine, aspartate and glutamate metabolism	4
bna00260	Glycine, serine and threonine metabolism	4
bna00270	Cysteine and methionine metabolism	4
bna00280	Valine, leucine and isoleucine degradation	4
bna00630	Glyoxylate and dicarboxylate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2
bna00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00280	Valine, leucine and isoleucine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	3
cit00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123120411

123092251

100682505

123452952

123439382

100835143

100826391

4327485

4332717

4351369

100273749

100285247

103634720

8083036

8067141

8084562

843282

100301891

732552

100785110

101244243

101248665

101259609

103831467

103831344

104879728

100263939

7498182

11420119

11445056

107887374

107946409

107918768

106402938

106353830

106354073

102591523

102580312

102608057

107775833

107827328

107776258

The preparation time of this page was 0.3 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	1	3	3	2	2	1	2	3	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 778383 (tae-r.2 coexpression data)

Top 50 enrichment test to 778383 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**