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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8054192   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   4333668   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 osa-u.5   4333675   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 tae-r.2   123087315   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 tae-r.2   123095658   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 hvu-r.1   123447018   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like 
 bdi-r.1   100843355   protein WHAT'S THIS FACTOR 1 homolog 
 gma-u.5   100804418   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bra-r.6   103832390   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 vvi-u.5   100256382   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ppo-u.5   18095765   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5   120577614   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107949291   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107944585   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107905872   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bna-r.1   106449823   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like 
 cit-r.1   102615419   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 nta-r.1   107815517   DNA polymerase zeta processivity subunit 
 nta-r.1   107764243   DNA polymerase zeta processivity subunit-like 

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Top 50 coexpressed genes to 8054192 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8054192 (sbi-r.1 coexpression data)

CoexMap"8054192"


sbiLOC8054192 | Entrez gene ID : 8054192      
Species sbi osa tae hvu bdi gma bra vvi ppo mtr ghi bna cit nta cre ath sly zma sot
Paralog 1 2 2 1 1 1 1 1 1 1 3 1 1 2 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002464099.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  cyto 2,  cyto_mito 1  (predict for XP_002464099.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002464099.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8054192
osa-u.5
for
4333668
osa-u.5
for
4333675
tae-r.2
for
123087315
tae-r.2
for
123095658
hvu-r.1
for
123447018
bdi-r.1
for
100843355
gma-u.5
for
100804418
bra-r.6
for
103832390
vvi-u.5
for
100256382
ppo-u.5
for
18095765
mtr-u.5
for
120577614
ghi-r.1
for
107949291
ghi-r.1
for
107944585
ghi-r.1
for
107905872
bna-r.1
for
106449823
cit-r.1
for
102615419
nta-r.1
for
107815517
nta-r.1
for
107764243


Ortholog ID: 8317
Species sbi osa osa tae hvu bdi gma bra vvi ppo mtr ghi ghi ghi bna cit nta nta
Symbol LOC8054192 LOC4333668 LOC4333675 LOC123095658 LOC123447018 LOC100843355 LOC100804418 LOC103832390 LOC100256382 LOC18095765 LOC120577614 LOC107944585 LOC107905872 LOC107903818 LOC106449823 LOC102615419 LOC107815517 LOC107764243
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein WHAT'S THIS FACTOR 1 homolog protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein WHAT'S THIS FACTOR 1 homolog, chloroplastic DNA polymerase zeta processivity subunit DNA polymerase zeta processivity subunit-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8054192 4333668 4333675 123095658 123447018 100843355 100804418 103832390 100256382 18095765 120577614 107944585 107905872 107903818 106449823 102615419 107815517 107764243
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