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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8054732   pentatricopeptide repeat-containing protein At1g69290 
 zma-u.5   103651122   pentatricopeptide repeat-containing protein At1g69290 
 osa-u.5   4325865   pentatricopeptide repeat-containing protein At1g69290 
 ath-u.5   AT1G68980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT1G69290   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100811600   pentatricopeptide repeat-containing protein At1g69290 
 sly-u.5   101250156   pentatricopeptide repeat-containing protein At1g69290-like 
 vvi-u.5   100854391   pentatricopeptide repeat-containing protein At1g69290 
 ppo-u.5   7498211   pentatricopeptide repeat-containing protein At1g69290 
 mtr-u.5   11436866   pentatricopeptide repeat-containing protein At1g69290 
 mtr-u.5   11424790   pentatricopeptide repeat-containing protein At1g69290 

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Top 50 coexpressed genes to 8054732 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8054732 (sbi-r.1 coexpression data)

CoexMap"8054732"


sbiLOC8054732 | Entrez gene ID : 8054732      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002458620.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_002458620.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_002458620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8054732

.
zma-u.5
for
103651122

.
osa-u.5
for
4325865

.
ath-u.5
for
AT1G68980

.
ath-u.5
for
AT1G69290

.
gma-u.5
for
100811600

.
sly-u.5
for
101250156

.
vvi-u.5
for
100854391

.
ppo-u.5
for
7498211

.
mtr-u.5
for
11436866

.
mtr-u.5
for
11424790

.


Ortholog ID: 9287
Species ath ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G68980 AT1G69290 LOC100811600 LOC101250156 LOC4325865 LOC103651122 LOC103852544 LOC100854391 LOC7498211 LOC11424790 LOC11436866 LOC123062283 LOC123071041 LOC123444598 LOC107920358 LOC106410245 LOC106354483 LOC8054732 LOC102591928 LOC102610502 LOC100829469 LOC107776779 LOC107770531
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290-like pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g68980, mitochondrial pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290-like pentatricopeptide repeat-containing protein At1g69290-like pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290-like pentatricopeptide repeat-containing protein At1g69290 pentatricopeptide repeat-containing protein At1g69290-like pentatricopeptide repeat-containing protein At1g69290-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
sly03083 Polycomb repressive complex 2
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04122 Sulfur relay system 6
ghi00730 Thiamine metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843231 843260 100811600 101250156 4325865 103651122 103852544 100854391 7498211 11424790 11436866 123062283 123071041 123444598 107920358 106410245 106354483 8054732 102591928 102610502 100829469 107776779 107770531
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