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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8054874   ribosomal RNA processing protein 36 homolog 
 zma-u.5   100282587   uncharacterized LOC100282587 
 osa-u.5   4347627   uncharacterized LOC4347627 
 tae-r.2   123122243   ribosomal RNA processing protein 36 homolog 
 tae-r.2   123112763   ribosomal RNA processing protein 36 homolog 
 tae-r.2   123104473   ribosomal RNA processing protein 36 homolog 
 hvu-r.1   123400008   ribosomal RNA processing protein 36 homolog 
 bdi-r.1   100841581   ribosomal RNA processing protein 36 homolog 
 ath-u.5   AT1G12650   rRNA biogenesis RRP36-like protein 
 gma-u.5   100804672   ribosomal RNA processing protein 36 homolog 
 gma-u.5   100779255   rRNA biogenesis protein RRP36 
 sly-u.5   101256597   uncharacterized LOC101256597 
 bra-r.6   103843114   ribosomal RNA processing protein 36 homolog 
 vvi-u.5   100246112   uncharacterized LOC100246112 
 ppo-u.5   7476079   uncharacterized LOC7476079 
 mtr-u.5   11442249   ribosomal RNA processing protein 36 homolog 
 ghi-r.1   107922901   ribosomal RNA processing protein 36 homolog 
 ghi-r.1   107904495   ribosomal RNA processing protein 36 homolog 
 bna-r.1   106413715   ribosomal RNA processing protein 36 homolog 
 bna-r.1   106397440   ribosomal RNA processing protein 36 homolog 
 sot-r.1   102603379   ribosomal RNA processing protein 36 homolog 
 cit-r.1   102611976   rRNA biogenesis protein rrp36 
 nta-r.1   107797821   uncharacterized LOC107797821 
 nta-r.1   107783063   uncharacterized LOC107783063 
 nta-r.1   107774289   uncharacterized LOC107774289 
 cre-r.1   CHLRE_09g401663v5   uncharacterized protein 

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Top 50 coexpressed genes to 8054874 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8054874 (sbi-r.1 coexpression data)

CoexMap"8054874"


sbiLOC8054874 | Entrez gene ID : 8054874      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 1 1 1 1 2 2 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (41 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (43 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO MF
Protein XP_002460547.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002460547.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_002460547.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8054874
zma-u.5
for
100282587
osa-u.5
for
4347627
tae-r.2
for
123122243
tae-r.2
for
123112763
tae-r.2
for
123104473
hvu-r.1
for
123400008
bdi-r.1
for
100841581
ath-u.5
for
AT1G12650
gma-u.5
for
100804672
gma-u.5
for
100779255
sly-u.5
for
101256597
bra-r.6
for
103843114
vvi-u.5
for
100246112
ppo-u.5
for
7476079
mtr-u.5
for
11442249
ghi-r.1
for
107922901
ghi-r.1
for
107904495
bna-r.1
for
106413715
bna-r.1
for
106397440
sot-r.1
for
102603379
cit-r.1
for
102611976
nta-r.1
for
107797821
nta-r.1
for
107783063
nta-r.1
for
107774289
cre-r.1
for
CHLRE_09g401663v5


Ortholog ID: 6698
Species sbi osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta nta cre
Symbol LOC8054874 LOC4347627 LOC123122243 LOC123112763 LOC123104473 LOC123400008 LOC100841581 AT1G12650 LOC100804672 LOC100779255 LOC101256597 LOC103843114 LOC100246112 LOC7476079 LOC11442249 LOC107922901 LOC107904495 LOC106413715 LOC106397440 LOC102603379 LOC102611976 LOC107797821 LOC107783063 LOC107774289 CHLRE_09g401663v5
Function* ribosomal RNA processing protein 36 homolog uncharacterized LOC4347627 ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog rRNA biogenesis RRP36-like protein ribosomal RNA processing protein 36 homolog rRNA biogenesis protein RRP36 uncharacterized LOC101256597 ribosomal RNA processing protein 36 homolog uncharacterized LOC100246112 uncharacterized LOC7476079 ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog ribosomal RNA processing protein 36 homolog rRNA biogenesis protein rrp36 uncharacterized LOC107797821 uncharacterized LOC107783063 uncharacterized LOC107774289 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
vvi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8054874 4347627 123122243 123112763 123104473 123400008 100841581 837821 100804672 100779255 101256597 103843114 100246112 7476079 11442249 107922901 107904495 106413715 106397440 102603379 102611976 107797821 107783063 107774289 5723166
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