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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055963   carotenoid cleavage dioxygenase 7, chloroplastic 
 zma-u.5   100502521   uncharacterized LOC100502521 
 osa-u.5   4336591   carotenoid cleavage dioxygenase 7, chloroplastic-like 
 vvi-u.5   100242750   carotenoid cleavage dioxygenase 7, chloroplastic 
 ppo-u.5   18105151   carotenoid cleavage dioxygenase 7, chloroplastic 
 mtr-u.5   11438975   carotenoid cleavage dioxygenase 7, chloroplastic 

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Top 50 coexpressed genes to 8055963 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055963 (sbi-r.1 coexpression data)

CoexMap"8055963"


sbiLOC8055963 | Entrez gene ID : 8055963      
Species sbi zma osa vvi ppo mtr sly bra nta cre hvu cit bdi sot tae ath bna ghi gma
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00906 [list] [network] Carotenoid biosynthesis (39 genes)
GO BP
GO:0016121 [list] [network] carotene catabolic process  (11 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (94 genes)  IEA  
GO MF
GO:0045549 [list] [network] 9-cis-epoxycarotenoid dioxygenase activity  (1 genes)  IEA  
Protein XP_002446902.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 3  (predict for XP_002446902.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002446902.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055963

.
zma-u.5
for
100502521

.
osa-u.5
for
4336591

.
vvi-u.5
for
100242750

.
ppo-u.5
for
18105151

.
mtr-u.5
for
11438975

.


Ortholog ID: 9440
Species osa zma vvi ppo mtr hvu ghi ghi sbi nta nta
Symbol LOC4336591 LOC100502521 LOC100242750 LOC18105151 LOC11438975 LOC123427568 LOC107923980 LOC107945551 LOC8055963 LOC107767822 LOC107771847
Function* carotenoid cleavage dioxygenase 7, chloroplastic-like uncharacterized LOC100502521 carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic carotenoid cleavage dioxygenase 7, chloroplastic-like carotenoid cleavage dioxygenase 7, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 3
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta04146 Peroxisome 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4336591 100502521 100242750 18105151 11438975 123427568 107923980 107945551 8055963 107767822 107771847
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