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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056192   U-box domain-containing protein 19 
 zma-u.5   103653432   U-box domain-containing protein 18 
 zma-u.5   100281562   ubiquitin-protein ligase 
 osa-u.5   4346922   U-box domain-containing protein 19 
 osa-u.5   4345574   U-box domain-containing protein 19 
 ath-u.5   PUB18   plant U-box 18 
 ath-u.5   PUB19   ARM repeat superfamily protein 
 gma-u.5   100795816   U-box domain-containing protein 19 
 gma-u.5   100787869   U-box domain-containing protein 19 
 sly-u.5   101249360   U-box domain-containing protein 19 
 sly-u.5   101249811   U-box domain-containing protein 19-like 
 vvi-u.5   100243339   U-box domain-containing protein 19 
 vvi-u.5   100241707   U-box domain-containing protein 19-like 
 ppo-u.5   7458028   U-box domain-containing protein 19 
 ppo-u.5   7457723   U-box domain-containing protein 19 
 mtr-u.5   11446555   U-box domain-containing protein 19 
 mtr-u.5   11406349   U-box domain-containing protein 19 
 mtr-u.5   25489542   U-box domain-containing protein 18 

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Top 50 coexpressed genes to 8056192 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8056192 (sbi-r.1 coexpression data)

CoexMap"8056192"


sbiLOC8056192 | Entrez gene ID : 8056192    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002460159.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 4  (predict for XP_002460159.2)
Subcellular
localization
TargetP
other 6  (predict for XP_002460159.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056192

.
zma-u.5
for
103653432

.
zma-u.5
for
100281562

.
osa-u.5
for
4346922

.
osa-u.5
for
4345574

.
ath-u.5
for
PUB18

.
ath-u.5
for
PUB19

.
gma-u.5
for
100795816

.
gma-u.5
for
100787869

.
sly-u.5
for
101249360

.
sly-u.5
for
101249811

.
vvi-u.5
for
100243339

.
vvi-u.5
for
100241707

.
ppo-u.5
for
7458028

.
ppo-u.5
for
7457723

.
mtr-u.5
for
11446555

.
mtr-u.5
for
11406349

.
mtr-u.5
for
25489542

.


Ortholog ID: 3161
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol PUB19 PUB18 LOC100787869 LOC100795816 LOC101249811 LOC101249360 LOC4346922 LOC4345574 LOC103653432 LOC100281562 LOC103871832 LOC103829733 LOC100241707 LOC100243339 LOC7457723 LOC7458028 LOC11406349 LOC11446555 LOC123121415 LOC123430895 LOC123395831 LOC107909632 LOC121224460 LOC106350340 LOC125601289 LOC8056192 LOC102591646 LOC107062219 LOC102608641 LOC102613373 LOC100835758 LOC107783945 LOC107788924
Function* ARM repeat superfamily protein plant U-box 18 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 18 ubiquitin-protein ligase U-box domain-containing protein 18 U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 19-like U-box domain-containing protein 18 U-box domain-containing protein 19 U-box domain-containing protein 18 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19-like U-box domain-containing protein 18-like U-box domain-containing protein 18 U-box domain-containing protein 19-like U-box domain-containing protein 19 U-box domain-containing protein 19 U-box domain-containing protein 18-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 6
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 8
sly04016 MAPK signaling pathway - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 5
zma04075 Plant hormone signal transduction 5
zma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 5
bra04075 Plant hormone signal transduction 5
bra00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 5
bra04075 Plant hormone signal transduction 5
bra00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo04016 MAPK signaling pathway - plant 5
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
mtr04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 4
tae04075 Plant hormone signal transduction 4
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 3
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 6
nta04075 Plant hormone signal transduction 6
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842314 837597 100787869 100795816 101249811 101249360 4346922 4345574 103653432 100281562 103871832 103829733 100241707 100243339 7457723 7458028 11406349 11446555 123121415 123430895 123395831 107909632 121224460 106350340 125601289 8056192 102591646 107062219 102608641 102613373 100835758 107783945 107788924
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