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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056458   OTU domain-containing protein DDB_G0284757 
 zma-u.5   100279737   uncharacterized LOC100279737 
 zma-u.5   118472054   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like 
 zma-u.5   100192862   Cysteine proteinases superfamily protein 
 osa-u.5   4341800   OTU domain-containing protein DDB_G0284757 
 osa-u.5   4334861   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 osa-u.5   4335733   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 ath-u.5   AT3G02070   Cysteine proteinases superfamily protein 
 ath-u.5   AT3G22260   Cysteine proteinases superfamily protein 
 ath-u.5   AT5G04250   Cysteine proteinases superfamily protein 
 gma-u.5   100820379   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 gma-u.5   100814418   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 gma-u.5   100814098   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 sly-u.5   101252879   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 sly-u.5   101253373   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 sly-u.5   101253803   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 vvi-u.5   100257696   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 vvi-u.5   100255072   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 vvi-u.5   100254784   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 ppo-u.5   7479863   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 ppo-u.5   7453730   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 mtr-u.5   11429553   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 mtr-u.5   25495879   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 mtr-u.5   25489619   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 

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Top 50 coexpressed genes to 8056458 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8056458 (sbi-r.1 coexpression data)

CoexMap"8056458"


sbiLOC8056458 | Entrez gene ID : 8056458      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (78 genes)  IEA  
GO CC
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (64 genes)  IEA  
Protein XP_002454789.1 [sequence] [blastp]
XP_021315588.1 [sequence] [blastp]
XP_021315589.1 [sequence] [blastp]
XP_021315590.1 [sequence] [blastp]
XP_021315591.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  plas 1,  chlo 1,  cyto 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_002454789.1)
nucl 7,  plas 1,  chlo 1,  cyto 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_021315588.1)
nucl 7,  plas 1,  chlo 1,  cyto 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_021315589.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 1,  cysk_nucl 1,  cyto_E.R. 1  (predict for XP_021315590.1)
nucl 4,  cyto 4,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_021315591.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002454789.1)
other 8  (predict for XP_021315588.1)
other 8  (predict for XP_021315589.1)
other 8  (predict for XP_021315590.1)
other 8  (predict for XP_021315591.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056458

.
zma-u.5
for
100279737

.
zma-u.5
for
118472054

.
zma-u.5
for
100192862

.
osa-u.5
for
4341800

.
osa-u.5
for
4334861

.
osa-u.5
for
4335733

.
ath-u.5
for
AT3G02070

.
ath-u.5
for
AT3G22260

.
ath-u.5
for
AT5G04250

.
gma-u.5
for
100820379

.
gma-u.5
for
100814418

.
gma-u.5
for
100814098

.
sly-u.5
for
101252879

.
sly-u.5
for
101253373

.
sly-u.5
for
101253803

.
vvi-u.5
for
100257696

.
vvi-u.5
for
100255072

.
vvi-u.5
for
100254784

.
ppo-u.5
for
7479863

.
ppo-u.5
for
7453730

.
mtr-u.5
for
11429553

.
mtr-u.5
for
25495879

.
mtr-u.5
for
25489619

.


Ortholog ID: 396
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G22260 AT5G04250 LOC100814098 LOC101252879 LOC101253803 LOC4334861 LOC4341800 LOC100282393 LOC103641678 LOC103834681 LOC103855480 LOC100243216 LOC100254784 LOC7453730 LOC7466285 LOC11418392 LOC25495879 LOC123136514 LOC123132437 LOC123426605 LOC123407212 LOC107948555 LOC107936011 LOC106428424 LOC125602344 CHLRE_12g541100v5 LOC8076110 LOC8072060 LOC102579466 LOC102599183 LOC102627972 LOC102615448 LOC100833552 LOC100841273 LOC107804972 LOC107815727
Function* Cysteine proteinases superfamily protein Cysteine proteinases superfamily protein OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OTU domain-containing protein DDB_G0284757 uncharacterized LOC100282393 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like uncharacterized protein OTU domain-containing protein DDB_G0284757 OTU domain-containing protein DDB_G0284757 OTU domain-containing protein DDB_G0284757-like OTU domain-containing protein DDB_G0284757 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like OTU domain-containing protein DDB_G0284757 uncharacterized LOC100841273 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo00052 Galactose metabolism 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03420 Nucleotide excision repair 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 4
sot04075 Plant hormone signal transduction 3
sot04981 Folate transport and metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00250 Alanine, aspartate and glutamate metabolism 2
cit00330 Arginine and proline metabolism 2
cit04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821796 830304 100814098 101252879 101253803 4334861 4341800 100282393 103641678 103834681 103855480 100243216 100254784 7453730 7466285 11418392 25495879 123136514 123132437 123426605 123407212 107948555 107936011 106428424 125602344 5719498 8076110 8072060 102579466 102599183 102627972 102615448 100833552 100841273 107804972 107815727
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