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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8056619   transcription factor UNE12 
 zma-u.5   100285681   uncharacterized LOC100285681 
 zma-u.5   100272246   uncharacterized LOC100272246 
 osa-u.5   4334429   transcription factor UNE12 
 osa-u.5   4342572   transcription factor UNE12 
 ath-u.5   UNE12   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G03040   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100793177   transcription factor UNE12 
 gma-u.5   100807570   transcription factor UNE12 
 gma-u.5   100808932   transcription factor UNE12 
 sly-u.5   101267267   transcription factor UNE12 
 sly-u.5   101258920   transcription factor UNE12 
 sly-u.5   101243823   transcription factor UNE12 
 vvi-u.5   100247732   transcription factor UNE12 
 vvi-u.5   100264830   transcription factor UNE12 
 vvi-u.5   100262267   transcription factor UNE12 
 ppo-u.5   7487670   transcription factor UNE12 
 ppo-u.5   7492138   transcription factor UNE12 
 ppo-u.5   7480002   transcription factor UNE12 
 mtr-u.5   25484640   transcription factor UNE12 
 mtr-u.5   11425606   transcription factor UNE12 

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Top 50 coexpressed genes to 8056619 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8056619 (sbi-r.1 coexpression data)

CoexMap"8056619"


sbiLOC8056619 | Entrez gene ID : 8056619      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (203 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (251 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (479 genes)  IEA  
Protein XP_002461549.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_002461549.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002461549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8056619

.
zma-u.5
for
100285681

.
zma-u.5
for
100272246

.
osa-u.5
for
4334429

.
osa-u.5
for
4342572

.
ath-u.5
for
UNE12

.
ath-u.5
for
AT1G03040

.
gma-u.5
for
100793177

.
gma-u.5
for
100807570

.
gma-u.5
for
100808932

.
sly-u.5
for
101267267

.
sly-u.5
for
101258920

.
sly-u.5
for
101243823

.
vvi-u.5
for
100247732

.
vvi-u.5
for
100264830

.
vvi-u.5
for
100262267

.
ppo-u.5
for
7487670

.
ppo-u.5
for
7492138

.
ppo-u.5
for
7480002

.
mtr-u.5
for
25484640

.
mtr-u.5
for
11425606

.


Ortholog ID: 2096
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G03040 UNE12 LOC100793177 LOC100797789 LOC101267267 LOC101258920 LOC4342572 LOC4334429 LOC100272246 LOC100285681 LOC103836733 LOC103858754 LOC100262267 LOC100264830 LOC7492138 LOC7487670 LOC11425606 LOC25484640 LOC123123218 LOC123105422 LOC123452725 LOC107941649 LOC107955473 LOC106398478 LOC106438684 LOC8056619 LOC8081254 LOC102606091 LOC102577469 LOC102616855 LOC102608430 LOC100831805 LOC100831162 LOC107817997 LOC107824933
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 uncharacterized LOC100272246 uncharacterized LOC100285681 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12-like transcription factor UNE12 transcription factor UNE12 transcription factor UNE12-like transcription factor UNE12-like transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 uncharacterized LOC102577469 transcription factor UNE12-like transcription factor UNE12 transcription factor UNE12 transcription factor UNE12 transcription factor UNE12-like transcription factor UNE12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00908 Zeatin biosynthesis 2
mtr04712 Circadian rhythm - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 4
bdi04142 Lysosome 2
bdi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta03015 mRNA surveillance pathway 4
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839446 828126 100793177 100797789 101267267 101258920 4342572 4334429 100272246 100285681 103836733 103858754 100262267 100264830 7492138 7487670 11425606 25484640 123123218 123105422 123452725 107941649 107955473 106398478 106438684 8056619 8081254 102606091 102577469 102616855 102608430 100831805 100831162 107817997 107824933
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