ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8057596	uncharacterized LOC8057596
zma-u.5	103641966	uncharacterized LOC103641966
zma-u.5	100381487	uncharacterized LOC100381487
osa-u.5	4336693	uncharacterized LOC4336693
tae-r.2	123054153	uncharacterized LOC123054153
tae-r.2	123039326	uncharacterized LOC123039326
tae-r.2	123176341	uncharacterized LOC123176341
hvu-r.1	123427484	uncharacterized LOC123427484
bdi-r.1	100827543	uncharacterized LOC100827543
ath-u.5	AT3G43610	Spc97 / Spc98 family of spindle pole body (SBP) component
gma-u.5	100780017	uncharacterized LOC100780017
sly-u.5	101258919	uncharacterized LOC101258919
bra-r.6	103873205	uncharacterized LOC103873205
vvi-u.5	100255993	uncharacterized LOC100255993
ppo-u.5	18102200	uncharacterized LOC18102200
mtr-u.5	25494473	uncharacterized LOC25494473
ghi-r.1	121229281	uncharacterized LOC121229281
ghi-r.1	121217643	gamma-tubulin complex component 6
ghi-r.1	107959243	uncharacterized LOC107959243
bna-r.1	106366356	uncharacterized LOC106366356
bna-r.1	106347600	uncharacterized LOC106347600
bna-r.1	125610312	uncharacterized LOC125610312
sot-r.1	102597908	uncharacterized LOC102597908
cit-r.1	102612298	uncharacterized LOC102612298
nta-r.1	107827053	uncharacterized LOC107827053
nta-r.1	107803639	uncharacterized LOC107803639

Annotation

functional annotation

KEGG

GO BP

GO:0007020 [list] [network] microtubule nucleation	(8 genes)	IEA
GO:0031122 [list] [network] cytoplasmic microtubule organization	(20 genes)	IEA
GO:0051225 [list] [network] spindle assembly	(34 genes)	IEA
GO:0051321 [list] [network] meiotic cell cycle	(98 genes)	IEA
GO:0000278 [list] [network] mitotic cell cycle	(188 genes)	IEA

GO CC

GO:0000923 [list] [network] equatorial microtubule organizing center	(5 genes)	IEA
GO:0000930 [list] [network] gamma-tubulin complex	(7 genes)	IEA
GO:0000922 [list] [network] spindle pole	(11 genes)	IEA
GO:0005813 [list] [network] centrosome	(37 genes)	IEA

GO MF

GO:0043015 [list] [network] gamma-tubulin binding	(5 genes)	IEA
GO:0051011 [list] [network] microtubule minus-end binding	(7 genes)	IEA

Protein

XP_021318773.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 2, cyto 1, cysk 1

(predict for XP_021318773.1)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for XP_021318773.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8057596	zma-u.5 for 103641966	zma-u.5 for 100381487	osa-u.5 for 4336693	tae-r.2 for 123054153	tae-r.2 for 123039326	tae-r.2 for 123176341	hvu-r.1 for 123427484	bdi-r.1 for 100827543	ath-u.5 for AT3G43610	gma-u.5 for 100780017	sly-u.5 for 101258919	bra-r.6 for 103873205	vvi-u.5 for 100255993	ppo-u.5 for 18102200	mtr-u.5 for 25494473	ghi-r.1 for 121229281	ghi-r.1 for 121217643	ghi-r.1 for 107959243	bna-r.1 for 106366356	bna-r.1 for 106347600	bna-r.1 for 125610312	sot-r.1 for 102597908	cit-r.1 for 102612298	nta-r.1 for 107827053	nta-r.1 for 107803639

Ortholog

Ortholog ID: 8970

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8057596

uncharacterized LOC103641966

uncharacterized LOC100381487

uncharacterized LOC4336693

uncharacterized LOC123054153

uncharacterized LOC123039326

uncharacterized LOC123191813

uncharacterized LOC123427484

uncharacterized LOC100827543

Spc97 / Spc98 family of spindle pole body (SBP) component

uncharacterized LOC100780017

uncharacterized LOC101258919

uncharacterized LOC103873205

uncharacterized LOC100255993

uncharacterized LOC18102200

uncharacterized LOC25494473

uncharacterized LOC121229281

gamma-tubulin complex component 6

uncharacterized LOC107959243

uncharacterized LOC106366356

uncharacterized LOC106347600

uncharacterized LOC125610312

uncharacterized LOC102597908

uncharacterized LOC102612298

uncharacterized LOC107827053

uncharacterized LOC107803639

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3
tae03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03015	mRNA surveillance pathway	4
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	3
hvu03082	ATP-dependent chromatin remodeling	2
hvu03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr00562	Inositol phosphate metabolism	2
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	4
ghi04070	Phosphatidylinositol signaling system	4
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	4
ghi04070	Phosphatidylinositol signaling system	4
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03430	Mismatch repair	5
nta03460	Fanconi anemia pathway	3
nta03440	Homologous recombination	3
nta03030	DNA replication	2
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03460	Fanconi anemia pathway	4
nta03430	Mismatch repair	2
nta03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

8057596

103641966

100381487

4336693

123054153

123039326

123191813

123427484

100827543

823458

100780017

101258919

103873205

100255993

18102200

25494473

121229281

121217643

107959243

106366356

106347600

125610312

102597908

102612298

107827053

107803639

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8057596 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8057596 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	2	1	3	1	1	1	1	1	1	1	1	1	3	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8057596 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8057596 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**