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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  112163627  uncharacterized LOC112163627 
 ath-u.5  MEF1  mitochondrial RNAediting factor 1 
 gma-u.5  100800235  putative pentatricopeptide repeat-containing protein At5g52630 
 sly-u.5  101247893  putative pentatricopeptide repeat-containing protein At5g52630 
 vvi-u.5  100246870  putative pentatricopeptide repeat-containing protein At5g52630 
 ppo-u.5  7484008  putative pentatricopeptide repeat-containing protein At5g52630 
 mtr-u.5  11437918  putative pentatricopeptide repeat-containing protein At5g52630 

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Top 50 coexpressed genes to 112163627 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112163627 (zma-u.5 coexpression data)

CoexMap"8058243"


sbiLOC8058243 | Entrez gene ID : 8058243
Species zma ath gma sly vvi ppo mtr sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002456056.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  vacu 1,  E.R._vacu 1,  chlo 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002456056.1)
Subcellular
localization
TargetP
scret 1  (predict for XP_002456056.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
112163627

.

ath-u.5
for
MEF1

.

gma-u.5
for
100800235

.

sly-u.5
for
101247893

.

vvi-u.5
for
100246870

.

ppo-u.5
for
7484008

.

mtr-u.5
for
11437918

.


Ortholog ID: 11759
Species ath gma sly zma bra vvi ppo mtr tae tae hvu ghi bna bna sot cit bdi nta nta
Symbol MEF1 LOC100800235 LOC101247893 LOC112163627 LOC103844748 LOC100246870 LOC7484008 LOC11437918 LOC123078679 LOC123070234 LOC123443986 LOC107937421 LOC106403117 LOC106421412 LOC102595773 LOC102630522 LOC106865933 LOC107792537 LOC107811746
Function* mitochondrial RNAediting factor 1 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 uncharacterized LOC112163627 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835340 100800235 101247893 112163627 103844748 100246870 7484008 11437918 123078679 123070234 123443986 107937421 106403117 106421412 102595773 102630522 106865933 107792537 107811746
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