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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058266   vacuolar protein sorting-associated protein 25 
 zma-u.5   100283903   vacuolar protein sorting protein 25 
 osa-u.5   4327163   vacuolar protein sorting-associated protein 25 
 ath-u.5   VPS25   E2F/DP family winged-helix DNA-binding domain-containing protein 
 gma-u.5   100803388   vacuolar protein sorting-associated protein 25 
 gma-u.5   100798066   vacuolar protein sorting-associated protein 25 
 sly-u.5   101265760   vacuolar protein sorting-associated protein 25 
 vvi-u.5   100264410   vacuolar protein sorting-associated protein 25 
 ppo-u.5   18094111   vacuolar protein sorting-associated protein 25 
 mtr-u.5   11413655   vacuolar protein sorting-associated protein 25 

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Top 50 coexpressed genes to 8058266 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058266 (sbi-r.1 coexpression data)

CoexMap"8058266"


sbiLOC8058266 | Entrez gene ID : 8058266      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04144 [list] [network] Endocytosis (145 genes)
GO BP
GO:0043328 [list] [network] protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway  (20 genes)  IEA  
GO CC
GO:0000814 [list] [network] ESCRT II complex  (4 genes)  IEA  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (9 genes)  IEA  
GO:0005198 [list] [network] structural molecule activity  (443 genes)  IEA  
Protein XP_002458255.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto_nucl 4,  cyto 3,  mito 1,  plas 1,  mito_plas 1  (predict for XP_002458255.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_002458255.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058266

.
zma-u.5
for
100283903

.
osa-u.5
for
4327163

.
ath-u.5
for
VPS25

.
gma-u.5
for
100803388

.
gma-u.5
for
100798066

.
sly-u.5
for
101265760

.
vvi-u.5
for
100264410

.
ppo-u.5
for
18094111

.
mtr-u.5
for
11413655

.


Ortholog ID: 7281
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit nta nta
Symbol VPS25 LOC100803388 LOC100798066 LOC101265760 LOC4327163 LOC100283903 LOC103857037 LOC100264410 LOC18094111 LOC11413655 LOC123070257 LOC123078706 LOC123441189 LOC123444009 LOC107938570 LOC121215633 LOC106423206 LOC106431678 CHLRE_02g076400v5 LOC8058266 LOC102584623 LOC102594130 LOC102621639 LOC107761996 LOC107823986
Function* E2F/DP family winged-helix DNA-binding domain-containing protein vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25-like vacuolar protein sorting-associated protein 25-like vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 uncharacterized protein vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25-like vacuolar protein sorting-associated protein 25 vacuolar protein sorting-associated protein 25-like vacuolar protein sorting-associated protein 25
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath03040 Spliceosome 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma03018 RNA degradation 2
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 3
ppo04145 Phagosome 3
ppo04148 Efferocytosis 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00190 Oxidative phosphorylation 3
tae00330 Arginine and proline metabolism 2
tae04142 Lysosome 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
tae04144 Endocytosis 3
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 7
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre03018 RNA degradation 2
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827637 100803388 100798066 101265760 4327163 100283903 103857037 100264410 18094111 11413655 123070257 123078706 123441189 123444009 107938570 121215633 106423206 106431678 5727212 8058266 102584623 102594130 102621639 107761996 107823986
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