ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8058352	bet1-like protein At4g14600
sbi-r.1	8081997	bet1-like protein At1g29060
zma-u.5	100382407	uncharacterized LOC100382407
zma-u.5	100276126	uncharacterized LOC100276126
osa-u.5	4343711	bet1-like protein At4g14600
osa-u.5	4331882	bet1-like protein At4g14600
tae-r.2	123044440	bet1-like protein At4g14600
tae-r.2	123052303	bet1-like protein At4g14600
tae-r.2	123188106	bet1-like protein At4g14600
hvu-r.1	123425575	bet1-like protein At4g14600
bdi-r.1	100843636	bet1-like protein At4g14600
ath-u.5	AT4G14600	Target SNARE coiled-coil domain protein
ath-u.5	AT1G29060	Target SNARE coiled-coil domain protein
gma-u.5	100787783	bet1-like protein At4g14600
gma-u.5	100500358	uncharacterized LOC100500358
gma-u.5	100306642	uncharacterized LOC100306642
sly-u.5	101259211	bet1-like protein At4g14600
sly-u.5	101245755	bet1-like protein At4g14600
bra-r.6	103828987	bet1-like protein At4g14600
bra-r.6	103835301	bet1-like protein At4g14600
vvi-u.5	100260787	bet1-like protein At4g14600
vvi-u.5	100263950	bet1-like protein At4g14600
ppo-u.5	7486564	bet1-like protein At4g14600
mtr-u.5	11437121	bet1-like protein At4g14600
mtr-u.5	25489904	bet1-like protein At4g14600
ghi-r.1	121230329	bet1-like protein At4g14600
ghi-r.1	107931254	bet1-like protein At4g14600
ghi-r.1	107913377	bet1-like protein At4g14600
bna-r.1	106361664	bet1-like protein At4g14600
bna-r.1	106435519	bet1-like protein At4g14600
sot-r.1	102579420	bet1-like protein At4g14600
sot-r.1	102591156	bet1-like protein At4g14600
cit-r.1	102609375	bet1-like protein At4g14600
nta-r.1	107793187	bet1-like protein At4g14600
nta-r.1	107772535	bet1-like protein At4g14600
nta-r.1	107764886	bet1-like protein At4g14600
cre-r.1	CHLRE_09g405600v5	uncharacterized protein

Top 50 coexpressed genes to 8058352 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8058352 (sbi-r.1 coexpression data)

CoexMap"8058352"

[Cytoscape]

Annotation

functional annotation

KEGG

sbi04130 [list] [network] SNARE interactions in vesicular transport (41 genes)

GO BP

GO CC

GO MF

Protein

XP_002463081.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, plas 2, golg 2, golg_plas 2, nucl 1, mito 1

(predict for XP_002463081.1)

Subcellular
localization
TargetP

other 5

(predict for XP_002463081.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8058352	sbi-r.1 for 8081997	zma-u.5 for 100382407	zma-u.5 for 100276126	osa-u.5 for 4343711	osa-u.5 for 4331882	tae-r.2 for 123044440	tae-r.2 for 123052303	tae-r.2 for 123188106	hvu-r.1 for 123425575	bdi-r.1 for 100843636	ath-u.5 for AT4G14600	ath-u.5 for AT1G29060	gma-u.5 for 100787783	gma-u.5 for 100500358	gma-u.5 for 100306642	sly-u.5 for 101259211	sly-u.5 for 101245755	bra-r.6 for 103828987	bra-r.6 for 103835301	vvi-u.5 for 100260787	vvi-u.5 for 100263950	ppo-u.5 for 7486564	mtr-u.5 for 11437121	mtr-u.5 for 25489904	ghi-r.1 for 121230329	ghi-r.1 for 107931254	ghi-r.1 for 107913377	bna-r.1 for 106361664	bna-r.1 for 106435519	sot-r.1 for 102579420	sot-r.1 for 102591156	cit-r.1 for 102609375	nta-r.1 for 107793187	nta-r.1 for 107772535	nta-r.1 for 107764886	cre-r.1 for CHLRE_09g405600v5

Ortholog

Ortholog ID: 4262

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

bet1-like protein At4g14600

bet1-like protein At1g29060

uncharacterized LOC100382407

uncharacterized LOC100276126

bet1-like protein At4g14600

Target SNARE coiled-coil domain protein

bet1-like protein At4g14600

uncharacterized LOC100500358

uncharacterized LOC100306642

bet1-like protein At4g14600

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	2
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	5
zma04130	SNARE interactions in vesicular transport	3
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	5
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	5
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	3
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	4
hvu03060	Protein export	3
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	3
bdi03050	Proteasome	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03060	Protein export	3
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	4
ath04145	Phagosome	2
ath04120	Ubiquitin mediated proteolysis	2
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00410	beta-Alanine metabolism	2
gma00640	Propanoate metabolism	2
gma04146	Peroxisome	2
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma03040	Spliceosome	3
gma04144	Endocytosis	3
gma04130	SNARE interactions in vesicular transport	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3
gma04130	SNARE interactions in vesicular transport	2
gma04145	Phagosome	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	11
sly04130	SNARE interactions in vesicular transport	2
sly03060	Protein export	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	2
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	4
mtr04145	Phagosome	2
mtr04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	8
ghi03010	Ribosome	3
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	3
sot04120	Ubiquitin mediated proteolysis	3
sot04141	Protein processing in endoplasmic reticulum	3
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	4
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	3
cit00190	Oxidative phosphorylation	2
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04120	Ubiquitin mediated proteolysis	3

Expression

Expression pattern

Entrez Gene ID^*

8058352

8081997

100382407

100276126

4343711

4331882

123044440

123052303

123188106

123425575

100843636

827108

839780

100787783

100500358

100306642

101259211

101245755

103828987

103835301

100260787

100263950

7486564

11437121

25489904

107931254

107913377

121218218

106361664

111204686

102579420

102591156

102609375

107793187

107772535

107787894

5723210

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	2	3	1	1	2	3	2	2	2	1	2	3	2	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8058352 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8058352 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**