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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8058472   cytochrome b6-f complex iron-sulfur subunit, chloroplastic 
 zma-u.5   100273026   cytochrome b6-f complex iron-sulfur subunit 
 zma-u.5   100273354   uncharacterized LOC100273354 
 osa-u.5   4343570   cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like 
 ath-u.5   PETC   photosynthetic electron transfer C 
 gma-u.5   100799420   photosynthetic electron transfer C-like protein 
 gma-u.5   PETC   Rieske iron-sulphur protein precursor 
 sly-u.5   101243864   cytochrome b6-f complex iron-sulfur subunit, chloroplastic 
 vvi-u.5   100258879   cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic 
 vvi-u.5   100256300   cytochrome b6-f complex iron-sulfur subunit, chloroplastic 
 vvi-u.5   100245219   cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic 
 ppo-u.5   7498162   cytochrome b6-f complex iron-sulfur subunit, chloroplastic 
 ppo-u.5   7494443   cytochrome b6-f complex iron-sulfur subunit, chloroplastic 
 mtr-u.5   11427739   cytochrome b6-f complex iron-sulfur subunit, chloroplastic 

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Top 50 coexpressed genes to 8058472 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8058472 (sbi-r.1 coexpression data)

CoexMap"8058472"


sbiLOC8058472 | Entrez gene ID : 8058472      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 3 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00195 [list] [network] Photosynthesis (76 genes)
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (952 genes)  IEA  
GO MF
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (42 genes)  IEA  
Protein XP_002441121.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  vacu 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_002441121.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for XP_002441121.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8058472

.
zma-u.5
for
100273026

.
zma-u.5
for
100273354

.
osa-u.5
for
4343570

.
ath-u.5
for
PETC

.
gma-u.5
for
100799420

.
gma-u.5
for
PETC

.
sly-u.5
for
101243864

.
vvi-u.5
for
100258879

.
vvi-u.5
for
100256300

.
vvi-u.5
for
100245219

.
ppo-u.5
for
7498162

.
ppo-u.5
for
7494443

.
mtr-u.5
for
11427739

.


Ortholog ID: 6048
Species ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol PETC PETC LOC100799420 LOC101243864 LOC4343570 LOC100273026 LOC100273354 LOC103858708 LOC103846718 LOC100256300 LOC100258879 LOC7494443 LOC7498162 LOC11427739 LOC123188289 LOC123425725 LOC107909236 LOC106431526 LOC106438729 CHLRE_11g467689v5 LOC8058472 FES LOC102606718 LOC100821378 LOC107805497 LOC107765416
Function* photosynthetic electron transfer C Rieske iron-sulphur protein precursor photosynthetic electron transfer C-like protein cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like cytochrome b6-f complex iron-sulfur subunit uncharacterized LOC100273354 cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic uncharacterized protein cytochrome b6-f complex iron-sulfur subunit, chloroplastic putative Rieske Fe-S protein precursor cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit, chloroplastic cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 9
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 3
ath01230 Biosynthesis of amino acids 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00710 Carbon fixation by Calvin cycle 6
gma01200 Carbon metabolism 6
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 10
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 7
sly01200 Carbon metabolism 4
sly00710 Carbon fixation by Calvin cycle 3
sly00030 Pentose phosphate pathway 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 9
osa01200 Carbon metabolism 4
osa00190 Oxidative phosphorylation 3
osa00710 Carbon fixation by Calvin cycle 3
osa00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00710 Carbon fixation by Calvin cycle 6
zma00195 Photosynthesis 5
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma00196 Photosynthesis - antenna proteins 6
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00710 Carbon fixation by Calvin cycle 4
bra01200 Carbon metabolism 4
bra00190 Oxidative phosphorylation 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra01200 Carbon metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo00196 Photosynthesis - antenna proteins 3
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 8
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 10
tae01200 Carbon metabolism 10
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 5
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00710 Carbon fixation by Calvin cycle 7
cre00195 Photosynthesis 6
cre00630 Glyoxylate and dicarboxylate metabolism 4
cre00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 7
cit00630 Glyoxylate and dicarboxylate metabolism 5
cit01200 Carbon metabolism 5
cit01230 Biosynthesis of amino acids 2
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 10
bdi00710 Carbon fixation by Calvin cycle 8
bdi00195 Photosynthesis 6
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta03010 Ribosome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827996 100127419 100799420 101243864 4343570 100273026 100273354 103858708 103846718 100256300 100258879 7494443 7498162 11427739 123188289 123425725 107909236 106431526 106438729 5724296 8058472 102577449 102606718 100821378 107805497 107765416
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