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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059498   folylpolyglutamate synthase 
 zma-u.5   100194131   uncharacterized LOC100194131 
 zma-u.5   100285702   folylpolyglutamate synthase 
 osa-u.5   4331360   folylpolyglutamate synthase 
 osa-u.5   4349049   folylpolyglutamate synthase 
 ath-u.5   DFC   DHFS-FPGS homolog C 
 ath-u.5   DFD   DHFS-FPGS homolog D 
 ath-u.5   DFB   DHFS-FPGS homolog B 
 gma-u.5   100805027   folylpolyglutamate synthase 
 gma-u.5   100810539   folylpolyglutamate synthase 
 gma-u.5   100811054   folylpolyglutamate synthase 
 sly-u.5   101250507   folylpolyglutamate synthase 
 sly-u.5   101246415   folylpolyglutamate synthase 
 vvi-u.5   100241124   folylpolyglutamate synthase 
 vvi-u.5   100262456   folylpolyglutamate synthase 
 ppo-u.5   7487982   folylpolyglutamate synthase 
 ppo-u.5   7458949   folylpolyglutamate synthase-like 
 ppo-u.5   7473592   folylpolyglutamate synthase 
 mtr-u.5   11408143   folylpolyglutamate synthase 
 mtr-u.5   25483316   folylpolyglutamate synthase 
 mtr-u.5   11430199   folylpolyglutamate synthase 

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Top 50 coexpressed genes to 8059498 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059498 (sbi-r.1 coexpression data)

CoexMap"8059498"


sbiLOC8059498 | Entrez gene ID : 8059498    
Species sbi zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra tae nta bna
Paralog 1 2 2 3 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00790 [list] [network] Folate biosynthesis (27 genes)
sbi01240 [list] [network] Biosynthesis of cofactors (256 genes)
sbi04981 [list] [network] Folate transport and metabolism (33 genes)
GO BP
GO:0046901 [list] [network] tetrahydrofolylpolyglutamate biosynthetic process  (3 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004326 [list] [network] tetrahydrofolylpolyglutamate synthase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_021306952.1 [sequence] [blastp]
XP_021306953.1 [sequence] [blastp]
XP_021306954.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_021306952.1)
chlo 9  (predict for XP_021306953.1)
chlo 9,  mito 1  (predict for XP_021306954.1)
Subcellular
localization
TargetP
mito 4,  chlo 4  (predict for XP_021306952.1)
mito 4,  chlo 4  (predict for XP_021306953.1)
mito 4,  chlo 4  (predict for XP_021306954.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059498

.
zma-u.5
for
100194131

.
zma-u.5
for
100285702

.
osa-u.5
for
4331360

.
osa-u.5
for
4349049

.
ath-u.5
for
DFC

.
ath-u.5
for
DFD

.
ath-u.5
for
DFB

.
gma-u.5
for
100805027

.
gma-u.5
for
100810539

.
gma-u.5
for
100811054

.
sly-u.5
for
101250507

.
sly-u.5
for
101246415

.
vvi-u.5
for
100241124

.
vvi-u.5
for
100262456

.
ppo-u.5
for
7487982

.
ppo-u.5
for
7458949

.
ppo-u.5
for
7473592

.
mtr-u.5
for
11408143

.
mtr-u.5
for
25483316

.
mtr-u.5
for
11430199

.


Ortholog ID: 2276
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol DFB DFD LOC100810539 LOC100811054 LOC101250507 LOC101246415 LOC4331360 LOC4349049 LOC100285702 LOC100194131 LOC103846946 LOC100262456 LOC100241124 LOC7490368 LOC7458949 LOC11408143 LOC25483316 LOC123094040 LOC123123233 LOC123433374 LOC123450035 LOC107900458 LOC107900459 LOC106380836 LOC106419503 CHLRE_05g239067v5 CHLRE_05g239100v5 LOC8059498 LOC8065198 LOC102593380 LOC102599413 LOC102625690 LOC102609894 LOC100831282 LOC100828805 LOC107801609 LOC107779364
Function* DHFS-FPGS homolog B DHFS-FPGS homolog D folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase uncharacterized LOC100194131 folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase-like folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase-like folylpolyglutamate synthase-like folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase uncharacterized protein uncharacterized protein folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase folylpolyglutamate synthase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 3
osa01240 Biosynthesis of cofactors 3
osa01230 Biosynthesis of amino acids 2
osa01212 Fatty acid metabolism 2
osa00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00670 One carbon pool by folate 3
zma01200 Carbon metabolism 3
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00620 Pyruvate metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00030 Pentose phosphate pathway 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo01230 Biosynthesis of amino acids 3
ppo00600 Sphingolipid metabolism 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04981 Folate transport and metabolism 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 3
ghi00790 Folate biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
ghi04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 4
ghi00790 Folate biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
ghi04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 6
bna01240 Biosynthesis of cofactors 6
bna04981 Folate transport and metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 6
bna01240 Biosynthesis of cofactors 6
bna04981 Folate transport and metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi04712 Circadian rhythm - plant 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot01230 Biosynthesis of amino acids 3
sot04981 Folate transport and metabolism 3
sot03040 Spliceosome 2
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi01230 Biosynthesis of amino acids 6
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bdi00480 Glutathione metabolism 3
bdi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00790 Folate biosynthesis 2
nta04981 Folate transport and metabolism 2
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830484 824729 100810539 100811054 101250507 101246415 4331360 4349049 100285702 100194131 103846946 100262456 100241124 7490368 7458949 11408143 25483316 123094040 123123233 123433374 123450035 107900458 107900459 106380836 106419503 66053408 66053410 8059498 8065198 102593380 102599413 102625690 102609894 100831282 100828805 107801609 107779364
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