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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8059673   nuclear cap-binding protein subunit 2 
 zma-u.5   100283725   uncharacterized LOC100283725 
 zma-u.5   100280855   uncharacterized LOC100280855 
 osa-u.5   4329963   nuclear cap-binding protein subunit 2-like 
 ath-u.5   CBP20   CAP-binding protein 20 
 gma-u.5   100789535   nuclear cap-binding protein subunit 2-like protein 
 gma-u.5   100776217   nuclear cap-binding protein subunit 2 
 sly-u.5   101268545   nuclear cap-binding protein subunit 2 
 vvi-u.5   100265980   nuclear cap-binding protein subunit 2 
 ppo-u.5   18106795   nuclear cap-binding protein subunit 2 
 ppo-u.5   7469563   nuclear cap-binding protein subunit 2 
 mtr-u.5   25487697   nuclear cap-binding protein subunit 2 

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Top 50 coexpressed genes to 8059673 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8059673 (sbi-r.1 coexpression data)

CoexMap"8059673"


sbiLOC8059673 | Entrez gene ID : 8059673      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)
sbi03015 [list] [network] mRNA surveillance pathway (120 genes)
sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (18 genes)  IEA  
GO CC
GO:0005846 [list] [network] nuclear cap binding complex  (2 genes)  IEA  
GO MF
GO:0000339 [list] [network] RNA cap binding  (8 genes)  IEA  
Protein XP_002454163.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_002454163.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_002454163.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8059673

.
zma-u.5
for
100283725

.
zma-u.5
for
100280855

.
osa-u.5
for
4329963

.
ath-u.5
for
CBP20

.
gma-u.5
for
100789535

.
gma-u.5
for
100776217

.
sly-u.5
for
101268545

.
vvi-u.5
for
100265980

.
ppo-u.5
for
18106795

.
ppo-u.5
for
7469563

.
mtr-u.5
for
25487697

.


Ortholog ID: 8180
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CBP20 LOC100776217 LOC100789535 LOC101268545 LOC4329963 LOC100280855 LOC100283725 LOC103827919 LOC100265980 LOC18106795 LOC7469563 LOC25487697 LOC123144796 LOC123137448 LOC123402335 LOC107909270 LOC107886794 LOC106406994 LOC106427505 CHLRE_10g437850v5 LOC8059673 LOC102577531 LOC102621252 LOC100823085 LOC107801362 LOC107772454
Function* CAP-binding protein 20 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2-like protein nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2-like uncharacterized LOC100280855 uncharacterized LOC100283725 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 uncharacterized protein nuclear cap-binding protein subunit 2 nuclear cap-binding protein CBP20 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2 nuclear cap-binding protein subunit 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 6
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03020 RNA polymerase 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 4
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
zma03040 Spliceosome 3
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03010 Ribosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 6
mtr03040 Spliceosome 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00900 Terpenoid backbone biosynthesis 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
ghi03015 mRNA surveillance pathway 3
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03050 Proteasome 4
bna03022 Basal transcription factors 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03050 Proteasome 4
bna03040 Spliceosome 3
bna00860 Porphyrin metabolism 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 4
sbi03420 Nucleotide excision repair 4
sbi03010 Ribosome 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03015 mRNA surveillance pathway 3
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 3
bdi03040 Spliceosome 3
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
nta03015 mRNA surveillance pathway 5
nta03040 Spliceosome 5
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 5
nta03015 mRNA surveillance pathway 5
nta03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834443 100776217 100789535 101268545 4329963 100280855 100283725 103827919 100265980 18106795 7469563 25487697 123144796 123137448 123402335 107909270 107886794 106406994 106427505 5716071 8059673 102577531 102621252 100823085 107801362 107772454
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