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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060250   dicer-like protein 4 
 zma-u.5   100500963   uncharacterized LOC100500963 
 zma-u.5   100192817   Double-stranded RNA binding motif protein family 
 osa-u.5   4347062   endoribonuclease Dicer homolog 4-like 
 ath-u.5   AT4G00420   Double-stranded RNA-binding domain (DsRBD)-containing protein 
 ath-u.5   RTL1   RNAse THREE-like protein 1 
 gma-u.5   100810647   ribonuclease 3-like protein 1 
 ppo-u.5   18097134   ribonuclease 3-like protein 1 
 mtr-u.5   25487965   dicer-like protein 4 

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Top 50 coexpressed genes to 8060250 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060250 (sbi-r.1 coexpression data)

CoexMap"8060250"


sbiLOC8060250 | Entrez gene ID : 8060250      
Species sbi zma osa ath gma ppo mtr hvu sot vvi tae nta bra cit ghi bna bdi sly cre
Paralog 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002460213.1 [sequence] [blastp]
XP_021310253.1 [sequence] [blastp]
XP_021310254.1 [sequence] [blastp]
XP_021310255.1 [sequence] [blastp]
XP_021310256.1 [sequence] [blastp]
XP_021310257.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for XP_002460213.1)
nucl 6,  chlo 2,  cyto 1  (predict for XP_021310253.1)
nucl 6,  chlo 2,  cyto 1  (predict for XP_021310254.1)
nucl 6,  chlo 2,  cyto 1  (predict for XP_021310255.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_021310256.1)
nucl 6,  chlo 1,  cyto 1  (predict for XP_021310257.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002460213.1)
other 9  (predict for XP_021310253.1)
other 9  (predict for XP_021310254.1)
other 9  (predict for XP_021310255.1)
other 8  (predict for XP_021310256.1)
other 8  (predict for XP_021310257.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060250

.
zma-u.5
for
100500963

.
zma-u.5
for
100192817

.
osa-u.5
for
4347062

.
ath-u.5
for
AT4G00420

.
ath-u.5
for
RTL1

.
gma-u.5
for
100810647

.
ppo-u.5
for
18097134

.
mtr-u.5
for
25487965

.


Ortholog ID: 9035
Species ath ath gma osa zma zma bra bra ppo mtr tae tae hvu ghi ghi bna bna sbi cit bdi nta nta
Symbol RTL1 AT4G00420 LOC100810647 LOC4347062 LOC100192817 LOC100500963 LOC103872383 LOC103853227 LOC18097134 LOC25487965 LOC123103883 LOC123112112 LOC123398220 LOC107889048 LOC107891630 LOC106351369 LOC106396767 LOC8060250 LOC102622895 LOC100838232 LOC107830084 LOC107763795
Function* RNAse THREE-like protein 1 Double-stranded RNA-binding domain (DsRBD)-containing protein ribonuclease 3-like protein 1 endoribonuclease Dicer homolog 4-like Double-stranded RNA binding motif protein family uncharacterized LOC100500963 ribonuclease 3-like protein 1 ribonuclease 3-like protein 1 ribonuclease 3-like protein 1 dicer-like protein 4 endoribonuclease Dicer homolog 4 uncharacterized LOC123112112 endoribonuclease Dicer homolog 4-like ribonuclease 3-like protein 1 ribonuclease 3-like protein 1 ribonuclease 3-like protein 1 ribonuclease 3-like protein 1 dicer-like protein 4 ribonuclease 3-like protein 1 dicer-like protein 4 ribonuclease 3-like protein 1 endoribonuclease Dicer homolog 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844404 828061 100810647 4347062 100192817 100500963 103872383 103853227 18097134 25487965 123103883 123112112 123398220 107889048 107891630 106351369 106396767 8060250 102622895 100838232 107830084 107763795
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