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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060433   probable E3 ubiquitin-protein ligase RHA1A 
 zma-u.5   100282290   RING-H2 finger protein ATL2L 
 zma-u.5   100281962   E3 ubiquitin-protein ligase RHA1B 
 zma-u.5   100217252   uncharacterized LOC100217252 
 osa-u.5   4330329   brassinosteroid-responsive RING protein 1 
 osa-u.5   4336763   brassinosteroid-responsive RING protein 1 
 osa-u.5   4344701   brassinosteroid-responsive RING protein 1 
 vvi-u.5   104882247   E3 ubiquitin-protein ligase RHA2B 
 ppo-u.5   7455024   E3 ubiquitin-protein ligase ATL59 

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Top 50 coexpressed genes to 8060433 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060433 (sbi-r.1 coexpression data)

CoexMap"8060433"


sbiLOC8060433 | Entrez gene ID : 8060433      
Species sbi zma osa vvi ppo sly bra nta mtr cre hvu cit bdi sot tae ath bna ghi gma
Paralog 1 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (192 genes)  IEA  
Protein XP_002448380.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  vacu 1,  extr 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002448380.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_002448380.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060433

.
zma-u.5
for
100282290

.
zma-u.5
for
100281962

.
zma-u.5
for
100217252

.
osa-u.5
for
4330329

.
osa-u.5
for
4336763

.
osa-u.5
for
4344701

.
vvi-u.5
for
104882247

.
ppo-u.5
for
7455024

.


Ortholog ID: 6449
Species osa osa zma zma vvi ppo tae tae hvu ghi sbi sbi sot bdi bdi nta
Symbol LOC9267990 LOC4330329 LOC100281962 LOC100217252 LOC104882247 LOC7455024 LOC123141652 LOC123147294 LOC123403303 LOC107930224 LOC8060433 LOC8076599 LOC107059125 LOC100844850 LOC100823272 LOC107832059
Function* brassinosteroid-responsive RING protein 1 brassinosteroid-responsive RING protein 1 E3 ubiquitin-protein ligase RHA1B uncharacterized LOC100217252 E3 ubiquitin-protein ligase RHA2B E3 ubiquitin-protein ligase ATL59 brassinosteroid-responsive RING protein 1 brassinosteroid-responsive RING protein 1 brassinosteroid-responsive RING protein 1-like E3 ubiquitin-protein ligase RHA2B probable E3 ubiquitin-protein ligase RHA1A putative RING-H2 finger protein ATL69 probable E3 ubiquitin-protein ligase RHA2B RING-H2 finger protein ATL63 E3 ubiquitin-protein ligase RHA1B brassinosteroid-responsive RING protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 7
vvi04626 Plant-pathogen interaction 3
vvi00941 Flavonoid biosynthesis 2
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 8
ghi00601 Glycosphingolipid biosynthesis - lacto and neolacto series 4
ghi00603 Glycosphingolipid biosynthesis - globo and isoglobo series 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 5
sot00190 Oxidative phosphorylation 4
sot04145 Phagosome 4
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta01230 Biosynthesis of amino acids 4
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 9267990 4330329 100281962 100217252 104882247 7455024 123141652 123147294 123403303 107930224 8060433 8076599 107059125 100844850 100823272 107832059
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