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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060706   uncharacterized LOC8060706 
 zma-u.5   100383150   evolutionarily conserved C-terminal region 2 
 zma-u.5   100383052   evolutionarily conserved C-terminal region 2 
 zma-u.5   100285206   uncharacterized LOC100285206 
 osa-u.5   4342510   YTH domain-containing protein ECT3 
 osa-u.5   4334103   YTH domain-containing protein ECT4 
 osa-u.5   4331683   YTH domain-containing protein ECT4 
 ath-u.5   ECT2   evolutionarily conserved C-terminal region 2 
 ath-u.5   ECT3   evolutionarily conserved C-terminal region 3 
 ath-u.5   ECT4   evolutionarily conserved C-terminal region 4 
 gma-u.5   100807919   YTH domain-containing protein ECT4 
 gma-u.5   100819200   YTH domain-containing protein ECT4 
 sly-u.5   101253713   YTH domain-containing protein ECT4 
 vvi-u.5   100249721   YTH domain-containing protein ECT2-like 
 vvi-u.5   100253534   YTH domain-containing protein ECT4 
 vvi-u.5   100245287   YTH domain-containing protein ECT4 
 ppo-u.5   7457687   YTH domain-containing protein ECT2 
 ppo-u.5   7463565   YTH domain-containing protein ECT2 
 ppo-u.5   7491036   YTH domain-containing protein ECT2 
 mtr-u.5   11422103   YTH domain-containing protein ECT2 
 mtr-u.5   11413827   YTH domain-containing protein ECT4 

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Top 50 coexpressed genes to 8060706 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060706 (sbi-r.1 coexpression data)

CoexMap"8060706"


sbiLOC8060706 | Entrez gene ID : 8060706      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 2 1 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061157 [list] [network] mRNA destabilization  (33 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002461519.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  pero 1,  golg 1  (predict for XP_002461519.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002461519.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060706

.
zma-u.5
for
100383150

.
zma-u.5
for
100383052

.
zma-u.5
for
100285206

.
osa-u.5
for
4342510

.
osa-u.5
for
4334103

.
osa-u.5
for
4331683

.
ath-u.5
for
ECT2

.
ath-u.5
for
ECT3

.
ath-u.5
for
ECT4

.
gma-u.5
for
100807919

.
gma-u.5
for
100819200

.
sly-u.5
for
101253713

.
vvi-u.5
for
100249721

.
vvi-u.5
for
100253534

.
vvi-u.5
for
100245287

.
ppo-u.5
for
7457687

.
ppo-u.5
for
7463565

.
ppo-u.5
for
7491036

.
mtr-u.5
for
11422103

.
mtr-u.5
for
11413827

.


Ortholog ID: 1310
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit cit bdi bdi nta nta
Symbol ECT4 ECT2 LOC100819200 LOC100807919 LOC101253713 LOC4334103 LOC4331683 LOC100285206 LOC100383052 LOC103831043 LOC103849773 LOC100245287 LOC100253534 LOC7463565 LOC7457687 LOC11413827 LOC11422103 LOC123105358 LOC123105359 LOC123452218 LOC123449490 LOC107899138 LOC107888398 LOC106357510 LOC106452277 LOC8060706 LOC8084117 LOC102583016 LOC102626352 LOC102618530 LOC100835140 LOC100821870 LOC107822646 LOC142176337
Function* evolutionarily conserved C-terminal region 4 evolutionarily conserved C-terminal region 2 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 uncharacterized LOC100285206 evolutionarily conserved C-terminal region 2 YTH domain-containing protein ECT3 YTH domain-containing protein ECT2 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT2 YTH domain-containing protein ECT2 YTH domain-containing protein ECT4 YTH domain-containing protein ECT2 YTH domain-containing protein ECT3 YTH domain-containing protein ECT1 YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4-like YTH domain-containing protein ECT3 YTH domain-containing protein ECT2 YTH domain-containing protein ECT2 YTH domain-containing protein ECT2-like uncharacterized LOC8060706 uncharacterized LOC8084117 uncharacterized LOC102583016 hypothetical protein YTH domain-containing protein ECT1 YTH domain-containing family protein 1 YTH domain-containing family protein 2 YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa03015 mRNA surveillance pathway 2
osa03008 Ribosome biogenesis in eukaryotes 2
osa03040 Spliceosome 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr03015 mRNA surveillance pathway 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03018 RNA degradation 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 7
sot04626 Plant-pathogen interaction 3
sot00290 Valine, leucine and isoleucine biosynthesis 2
sot00770 Pantothenate and CoA biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841997 820548 100819200 100807919 101253713 4334103 4331683 100285206 100383052 103831043 103849773 100245287 100253534 7463565 7457687 11413827 11422103 123105358 123105359 123452218 123449490 107899138 107888398 106357510 106452277 8060706 8084117 102583016 102626352 102618530 100835140 100821870 107822646 142176337
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