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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060877   actin-related protein 2/3 complex subunit 4 
 zma-u.5   100286207   uncharacterized LOC100286207 
 osa-u.5   4334780   actin-related protein 2/3 complex subunit 4 
 ath-u.5   ARPC4   binding protein 
 gma-u.5   100778688   actin-related protein 2/3 complex subunit 4 
 gma-u.5   100527736   uncharacterized LOC100527736 
 sly-u.5   101260916   actin-related protein 2/3 complex subunit 4 
 vvi-u.5   100253856   actin-related protein 2/3 complex subunit 4 
 ppo-u.5   18107079   actin-related protein 2/3 complex subunit 4 
 mtr-u.5   11426571   actin-related protein 2/3 complex subunit 4 

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Top 50 coexpressed genes to 8060877 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060877 (sbi-r.1 coexpression data)

CoexMap"8060877"


sbiLOC8060877 | Entrez gene ID : 8060877      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04144 [list] [network] Endocytosis (145 genes)
sbi04517 [list] [network] IgSF CAM signaling (39 genes)
sbi05100 [list] [network] Bacterial invasion of epithelial cells (20 genes)
GO BP
GO:0030041 [list] [network] actin filament polymerization  (4 genes)  IEA  
GO:0034314 [list] [network] Arp2/3 complex-mediated actin nucleation  (10 genes)  IEA  
GO CC
GO:0005885 [list] [network] Arp2/3 protein complex  (10 genes)  IEA  
GO:0015629 [list] [network] actin cytoskeleton  (49 genes)  IEA  
GO MF
GO:0051015 [list] [network] actin filament binding  (70 genes)  IEA  
Protein XP_002466102.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  mito 4,  chlo 1,  nucl 1  (predict for XP_002466102.1)
Subcellular
localization
TargetP
other 2  (predict for XP_002466102.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060877

.
zma-u.5
for
100286207

.
osa-u.5
for
4334780

.
ath-u.5
for
ARPC4

.
gma-u.5
for
100778688

.
gma-u.5
for
100527736

.
sly-u.5
for
101260916

.
vvi-u.5
for
100253856

.
ppo-u.5
for
18107079

.
mtr-u.5
for
11426571

.


Ortholog ID: 10566
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ARPC4 LOC100527736 LOC100778688 LOC101260916 LOC4334780 LOC100286207 LOC103863562 LOC100253856 LOC18107079 LOC11426571 LOC123114322 LOC123123807 LOC123395104 LOC107936055 LOC107934431 LOC106391584 LOC106445794 CHLRE_06g260800v5 LOC8060877 LOC102583856 LOC102618750 LOC100823545 LOC107811878 LOC107786182
Function* binding protein uncharacterized LOC100527736 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 uncharacterized LOC100286207 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 uncharacterized protein actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4 actin-related protein 2/3 complex subunit 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 6
ath04517 IgSF CAM signaling 3
ath05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 5
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ppo01230 Biosynthesis of amino acids 4
ppo04144 Endocytosis 3
ppo04517 IgSF CAM signaling 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 3
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
bna03040 Spliceosome 2
bna04144 Endocytosis 2
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04382 Cornified envelope formation 6
bna04144 Endocytosis 2
bna04517 IgSF CAM signaling 2
bna05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3770404 100527736 100778688 101260916 4334780 100286207 103863562 100253856 18107079 11426571 123114322 123123807 123395104 107936055 107934431 106391584 106445794 5722039 8060877 102583856 102618750 100823545 107811878 107786182
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