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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8061030   serine decarboxylase 1 
 zma-u.5   103653609   serine decarboxylase 1 
 zma-u.5   103627258   histidine decarboxylase-like 
 osa-u.5   4329593   serine decarboxylase 1 
 tae-r.2   123045443   serine decarboxylase 1 
 tae-r.2   123080895   serine decarboxylase 1 
 hvu-r.1   123445623   serine decarboxylase 1-like 
 hvu-r.1   123426701   serine decarboxylase 1 
 bdi-r.1   100826364   serine decarboxylase 1 
 bdi-r.1   100838169   serine decarboxylase 1 
 bdi-r.1   100846361   serine decarboxylase 1 
 ath-u.5   EMB1075   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 gma-u.5   100803953   serine decarboxylase 
 gma-u.5   100792053   aspartate aminotransferase superfamily protein 
 gma-u.5   100785163   serine decarboxylase 1 
 sly-u.5   101262912   serine decarboxylase 
 bra-r.6   103838694   serine decarboxylase 
 bra-r.6   103833314   serine decarboxylase 
 bra-r.6   103868741   serine decarboxylase 
 vvi-u.5   100258141   serine decarboxylase 
 ppo-u.5   7492459   serine decarboxylase 
 ppo-u.5   7466403   serine decarboxylase 
 mtr-u.5   11423584   serine decarboxylase 
 ghi-r.1   121229527   serine decarboxylase 
 ghi-r.1   121229631   serine decarboxylase 
 ghi-r.1   107922063   serine decarboxylase 
 bna-r.1   106427186   serine decarboxylase 
 bna-r.1   106345766   serine decarboxylase-like 
 bna-r.1   106386606   serine decarboxylase-like 
 sot-r.1   102579180   serine decarboxylase-like 
 cit-r.1   102629552   serine decarboxylase 
 nta-r.1   107782501   serine decarboxylase-like 
 nta-r.1   107816085   serine decarboxylase 
 cre-r.1   CHLRE_01g038250v5   uncharacterized protein 

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Top 50 coexpressed genes to 8061030 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8061030 (sbi-r.1 coexpression data)

CoexMap"8061030"


sbiLOC8061030 | Entrez gene ID : 8061030      
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 2 2 3 1 3 1 3 1 2 1 3 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00564 [list] [network] Glycerophospholipid metabolism (116 genes)
GO BP
GO:0019752 [list] [network] carboxylic acid metabolic process  (549 genes)  IEA  
GO CC
GO MF
GO:0016831 [list] [network] carboxy-lyase activity  (61 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (85 genes)  IEA  
Protein XP_002452231.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  pero 1,  E.R._vacu 1  (predict for XP_002452231.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002452231.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8061030
zma-u.5
for
103653609
zma-u.5
for
103627258
osa-u.5
for
4329593
tae-r.2
for
123045443
tae-r.2
for
123080895
hvu-r.1
for
123445623
hvu-r.1
for
123426701
bdi-r.1
for
100826364
bdi-r.1
for
100838169
bdi-r.1
for
100846361
ath-u.5
for
EMB1075
gma-u.5
for
100803953
gma-u.5
for
100792053
gma-u.5
for
100785163
sly-u.5
for
101262912
bra-r.6
for
103838694
bra-r.6
for
103833314
bra-r.6
for
103868741
vvi-u.5
for
100258141
ppo-u.5
for
7492459
ppo-u.5
for
7466403
mtr-u.5
for
11423584
ghi-r.1
for
121229527
ghi-r.1
for
121229631
ghi-r.1
for
107922063
bna-r.1
for
106427186
bna-r.1
for
106345766
bna-r.1
for
106386606
sot-r.1
for
102579180
cit-r.1
for
102629552
nta-r.1
for
107782501
nta-r.1
for
107816085
cre-r.1
for
CHLRE_01g038250v5


Ortholog ID: 4007
Species sbi zma zma osa tae tae hvu hvu bdi bdi bdi ath gma gma gma sly bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC8061030 LOC103653609 LOC103627258 LOC4329593 LOC123045443 LOC123063578 LOC123445623 LOC123426701 LOC100826364 LOC100838169 LOC100846361 EMB1075 LOC100803953 LOC100785163 LOC100795577 LOC101262912 LOC103838694 LOC103833314 LOC103868741 LOC100258141 LOC7492459 LOC7466403 LOC11423584 LOC121229631 LOC107922063 LOC107914114 LOC106427186 LOC106345766 LOC106429350 LOC102579180 LOC102629552 LOC107782501 LOC107816085 CHLRE_01g038250v5
Function* serine decarboxylase 1 serine decarboxylase 1 histidine decarboxylase-like serine decarboxylase 1 serine decarboxylase 1 serine decarboxylase 1 serine decarboxylase 1-like serine decarboxylase 1 serine decarboxylase 1 serine decarboxylase 1 serine decarboxylase 1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein serine decarboxylase serine decarboxylase 1 histidine decarboxylase-like serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase serine decarboxylase-like serine decarboxylase-like serine decarboxylase-like serine decarboxylase serine decarboxylase-like serine decarboxylase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 4
sbi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 5
zma01230 Biosynthesis of amino acids 4
zma01200 Carbon metabolism 4
zma00220 Arginine biosynthesis 3
zma00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
zma04145 Phagosome 5
zma00564 Glycerophospholipid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 8
tae00270 Cysteine and methionine metabolism 3
tae00543 Exopolysaccharide biosynthesis 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 7
tae01310 Nitrogen cycle 7
tae00564 Glycerophospholipid metabolism 4
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00620 Pyruvate metabolism 3
bdi00040 Pentose and glucuronate interconversions 2
bdi00053 Ascorbate and aldarate metabolism 2
bdi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 3
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi00330 Arginine and proline metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 5
bdi01200 Carbon metabolism 5
bdi00620 Pyruvate metabolism 3
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath01200 Carbon metabolism 4
ath00910 Nitrogen metabolism 4
ath01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00564 Glycerophospholipid metabolism 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 7
bra04142 Lysosome 5
bra05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra01240 Biosynthesis of cofactors 3
bra00860 Porphyrin metabolism 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00052 Galactose metabolism 2
vvi00500 Starch and sucrose metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 4
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 4
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03013 Nucleocytoplasmic transport 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8061030 103653609 103627258 4329593 123045443 123063578 123445623 123426701 100826364 100838169 100846361 840958 100803953 100785163 100795577 101262912 103838694 103833314 103868741 100258141 7492459 7466403 11423584 121229631 107922063 107914114 106427186 106345766 106429350 102579180 102629552 107782501 107816085 5715511
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