ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8061543	uncharacterized LOC8061543
sbi-r.1	8073818	uncharacterized LOC8073818
sbi-r.1	8077695	uncharacterized LOC8077695
sbi-r.1	8073549	uncharacterized LOC8073549
zma-u.5	100276420	uncharacterized LOC100276420
zma-u.5	100276874	uncharacterized LOC100276874
zma-u.5	100381837	NHL domain-containing protein
osa-u.5	4328817	uncharacterized LOC4328817
osa-u.5	4330615	uncharacterized LOC4330615
osa-u.5	4340723	uncharacterized LOC4340723
tae-r.2	123150357	uncharacterized LOC123150357
tae-r.2	123043874	uncharacterized LOC123043874
tae-r.2	123127431	uncharacterized LOC123127431
hvu-r.1	123411411	uncharacterized LOC123411411
hvu-r.1	123401816	uncharacterized LOC123401816
hvu-r.1	123406157	uncharacterized LOC123406157
bdi-r.1	100824092	uncharacterized LOC100824092
bdi-r.1	104584212	uncharacterized LOC104584212
bdi-r.1	100834977	uncharacterized LOC100834977
ath-u.5	AT3G14860	NHL domain-containing protein
ath-u.5	AT5G14890	potassium transporter
ath-u.5	AT1G23880	NHL domain-containing protein
gma-u.5	100816542	uncharacterized LOC100816542
gma-u.5	100816017	uncharacterized LOC100816017
sly-u.5	101256281	uncharacterized LOC101256281
sly-u.5	101246450	uncharacterized LOC101246450
sly-u.5	101247577	uncharacterized LOC101247577
bra-r.6	103859595	uncharacterized LOC103859595
bra-r.6	103851236	uncharacterized LOC103851236
bra-r.6	103846452	uncharacterized LOC103846452
vvi-u.5	100243227	uncharacterized LOC100243227
vvi-u.5	100266244	uncharacterized LOC100266244
vvi-u.5	100263777	uncharacterized LOC100263777
ppo-u.5	7493556	uncharacterized LOC7493556
ppo-u.5	18095451	uncharacterized LOC18095451
mtr-u.5	25495203	uncharacterized LOC25495203
mtr-u.5	25501285	uncharacterized LOC25501285
mtr-u.5	25501282	uncharacterized LOC25501282
ghi-r.1	107939214	uncharacterized LOC107939214
ghi-r.1	107960332	uncharacterized LOC107960332
ghi-r.1	107955585	uncharacterized LOC107955585
bna-r.1	106367580	uncharacterized LOC106367580
bna-r.1	106446501	uncharacterized LOC106446501
sot-r.1	102585981	uncharacterized LOC102585981
sot-r.1	102585637	uncharacterized LOC102585637
sot-r.1	102584279	uncharacterized LOC102584279
cit-r.1	102628926	uncharacterized LOC102628926
cit-r.1	102608622	uncharacterized LOC102608622
cit-r.1	102629403	hypothetical protein
nta-r.1	107820985	uncharacterized LOC107820985
nta-r.1	107773447	uncharacterized LOC107773447
nta-r.1	107775734	uncharacterized LOC107775734

Top 50 coexpressed genes to 8061543 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8061543 (sbi-r.1 coexpression data)

CoexMap"8061543"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002438219.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 2, golg 1, chlo_mito 1, E.R._vacu 1

(predict for XP_002438219.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_002438219.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8061543	sbi-r.1 for 8073818	sbi-r.1 for 8077695	sbi-r.1 for 8073549	zma-u.5 for 100276420	zma-u.5 for 100276874	zma-u.5 for 100381837	osa-u.5 for 4328817	osa-u.5 for 4330615	osa-u.5 for 4340723	tae-r.2 for 123150357	tae-r.2 for 123043874	tae-r.2 for 123127431	hvu-r.1 for 123411411	hvu-r.1 for 123401816	hvu-r.1 for 123406157	bdi-r.1 for 100824092	bdi-r.1 for 104584212	bdi-r.1 for 100834977	ath-u.5 for AT3G14860	ath-u.5 for AT5G14890	ath-u.5 for AT1G23880	gma-u.5 for 100816542	gma-u.5 for 100816017	sly-u.5 for 101256281	sly-u.5 for 101246450	sly-u.5 for 101247577	bra-r.6 for 103859595	bra-r.6 for 103851236	bra-r.6 for 103846452	vvi-u.5 for 100243227	vvi-u.5 for 100266244	vvi-u.5 for 100263777	ppo-u.5 for 7493556	ppo-u.5 for 18095451	mtr-u.5 for 25495203	mtr-u.5 for 25501285	mtr-u.5 for 25501282	ghi-r.1 for 107939214	ghi-r.1 for 107960332	ghi-r.1 for 107955585	bna-r.1 for 106367580	bna-r.1 for 106446501	sot-r.1 for 102585981	sot-r.1 for 102585637	sot-r.1 for 102584279	cit-r.1 for 102628926	cit-r.1 for 102608622	cit-r.1 for 102629403	nta-r.1 for 107820985	nta-r.1 for 107773447	nta-r.1 for 107775734

Ortholog

Ortholog ID: 709

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8061543

uncharacterized LOC8073818

uncharacterized LOC8073549

uncharacterized LOC100276874

uncharacterized LOC100276297

uncharacterized LOC100384592

uncharacterized LOC4328817

uncharacterized LOC4330615

uncharacterized LOC4345572

uncharacterized LOC123150357

uncharacterized LOC123137286

uncharacterized LOC123156753

uncharacterized LOC123401816

uncharacterized LOC123406157

uncharacterized LOC123424925

uncharacterized LOC100824092

uncharacterized LOC104584212

uncharacterized LOC100839308

NHL domain-containing protein

uncharacterized LOC100797570

uncharacterized LOC100793916

uncharacterized LOC100781836

uncharacterized LOC101256281

uncharacterized LOC101247577

uncharacterized LOC101255990

uncharacterized LOC103846452

uncharacterized LOC103831565

uncharacterized LOC100243227

uncharacterized LOC100266244

uncharacterized LOC100245328

uncharacterized LOC18095451

uncharacterized LOC18106640

uncharacterized LOC25501285

uncharacterized LOC25501282

uncharacterized LOC11416686

uncharacterized LOC107960332

uncharacterized LOC107898670

uncharacterized LOC107958576

uncharacterized LOC106401544

RING finger protein nhl-1

uncharacterized LOC102585981

uncharacterized LOC102585637

uncharacterized LOC102586185

uncharacterized LOC102628926

hypothetical protein

uncharacterized LOC102628107

uncharacterized LOC107773447

uncharacterized LOC107801174

uncharacterized LOC107805830

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	6
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	5
zma01210	2-Oxocarboxylic acid metabolism	4
zma00290	Valine, leucine and isoleucine biosynthesis	3
zma00770	Pantothenate and CoA biosynthesis	3
zma00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04145	Phagosome	4
sly04517	IgSF CAM signaling	4
sly04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00030	Pentose phosphate pathway	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	3
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00660	C5-Branched dibasic acid metabolism	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	6
bna00564	Glycerophospholipid metabolism	4
bna00565	Ether lipid metabolism	4
bna00053	Ascorbate and aldarate metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00670	One carbon pool by folate	2
nta04981	Folate transport and metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8061543

8073818

8073549

100276874

100276297

100384592

4328817

4330615

4345572

123150357

123137286

123156753

123401816

123406157

123424925

100824092

104584212

100839308

838999

839000

843364

100797570

100793916

100781836

101256281

101247577

101255990

103846452

103831565

100243227

100266244

100245328

18095451

18106640

25501285

25501282

11416686

107960332

107898670

107958576

106401544

106401546

102585981

102585637

102586185

102628926

102629403

102628107

107773447

107801174

107805830

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	3	2	3	3	3	2	3	3	2	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8061543 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8061543 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**