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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8061815   50S ribosomal protein 6, chloroplastic 
 zma-u.5   100284517   uncharacterized LOC100284517 
 osa-u.5   4350706   large ribosomal subunit protein cL38 
 ath-u.5   PSRP6   plastid-specific 50S ribosomal protein 6 
 gma-u.5   100805806   50S ribosomal protein 6, chloroplastic 
 sly-u.5   101246627   large ribosomal subunit protein cL38 
 vvi-u.5   100261673   large ribosomal subunit protein cL38 
 ppo-u.5   7467236   50S ribosomal protein 6, chloroplastic 
 mtr-u.5   11436654   50S ribosomal protein 6, chloroplastic 

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Top 50 coexpressed genes to 8061815 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8061815 (sbi-r.1 coexpression data)

CoexMap"8061815"


sbiLOC8061815 | Entrez gene ID : 8061815      
Species sbi zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra tae nta bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0006412 [list] [network] translation  (459 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (326 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (67 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
Protein XP_002456091.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_002456091.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_002456091.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8061815

.
zma-u.5
for
100284517

.
osa-u.5
for
4350706

.
ath-u.5
for
PSRP6

.
gma-u.5
for
100805806

.
sly-u.5
for
101246627

.
vvi-u.5
for
100261673

.
ppo-u.5
for
7467236

.
mtr-u.5
for
11436654

.


Ortholog ID: 8143
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi
Symbol PSRP6 LOC100805806 LOC101246627 LOC4350706 LOC100284517 LOC103845893 LOC103851136 LOC100261673 LOC7467236 LOC11436654 LOC123152248 LOC123156910 LOC123407793 LOC107957874 LOC107905182 LOC106433574 LOC106426191 LOC8061815 LOC102599194 LOC102617747 LOC100842486
Function* plastid-specific 50S ribosomal protein 6 50S ribosomal protein 6, chloroplastic large ribosomal subunit protein cL38 large ribosomal subunit protein cL38 uncharacterized LOC100284517 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic large ribosomal subunit protein cL38 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic-like 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic 50S ribosomal protein 6, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae00030 Pentose phosphate pathway 2
tae00230 Purine metabolism 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae00030 Pentose phosphate pathway 2
tae00230 Purine metabolism 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831655 100805806 101246627 4350706 100284517 103845893 103851136 100261673 7467236 11436654 123152248 123156910 123407793 107957874 107905182 106433574 106426191 8061815 102599194 102617747 100842486
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