ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8062441	protein NRT1/ PTR FAMILY 5.10
sbi-r.1	8060993	protein NRT1/ PTR FAMILY 5.10
sbi-r.1	8055194	protein NRT1/ PTR FAMILY 5.10
zma-u.5	100281589	uncharacterized LOC100281589
zma-u.5	100381733	Protein NRT1/ PTR FAMILY 5.10
osa-u.5	112937603	protein NRT1/ PTR FAMILY 5.10
osa-u.5	9270493	protein NRT1/ PTR FAMILY 5.10
osa-u.5	112935994	protein NRT1/ PTR FAMILY 5.10
tae-r.2	123062751	protein NRT1/ PTR FAMILY 5.10
tae-r.2	123062749	protein NRT1/ PTR FAMILY 5.10
tae-r.2	123182125	protein NRT1/ PTR FAMILY 5.10
hvu-r.1	123446444	protein NRT1/ PTR FAMILY 5.10-like
hvu-r.1	123440453	protein NRT1/ PTR FAMILY 5.10-like
bdi-r.1	100831418	protein NRT1/ PTR FAMILY 5.10
bdi-r.1	112270659	protein NRT1/ PTR FAMILY 5.16-like
bdi-r.1	100824280	protein NRT1/ PTR FAMILY 5.10
ath-u.5	AT1G22540	Major facilitator superfamily protein
ath-u.5	AT1G22550	Major facilitator superfamily protein
ath-u.5	AT1G72120	Major facilitator superfamily protein
gma-u.5	100782611	protein NRT1/ PTR FAMILY 5.10
gma-u.5	100776720	protein NRT1/ PTR FAMILY 5.10
sly-u.5	101256981	protein NRT1/ PTR FAMILY 5.10
bra-r.6	103830813	protein NRT1/ PTR FAMILY 5.11
bra-r.6	103830814	protein NRT1/ PTR FAMILY 5.14
vvi-u.5	100854655	protein NRT1/ PTR FAMILY 5.10
vvi-u.5	100254556	protein NRT1/ PTR FAMILY 5.10
ppo-u.5	112326053	protein NRT1/ PTR FAMILY 5.10
ppo-u.5	112325216	protein NRT1/ PTR FAMILY 5.10-like
mtr-u.5	25480837	protein NRT1/ PTR FAMILY 5.10
mtr-u.5	25491797	protein NRT1/ PTR FAMILY 5.10
mtr-u.5	25491799	protein NRT1/ PTR FAMILY 5.10
ghi-r.1	107910620	protein NRT1/ PTR FAMILY 5.10
ghi-r.1	107895068	protein NRT1/ PTR FAMILY 5.10
ghi-r.1	107920422	protein NRT1/ PTR FAMILY 5.10
bna-r.1	106353761	protein NRT1/ PTR FAMILY 5.12-like
sot-r.1	102597245	protein NRT1/ PTR FAMILY 5.10-like
cit-r.1	102615398	protein NRT1/ PTR FAMILY 5.10
cit-r.1	102615123	protein NRT1/ PTR FAMILY 5.10-like
nta-r.1	107785416	protein NRT1/ PTR FAMILY 5.10
nta-r.1	107791419	protein NRT1/ PTR FAMILY 5.10-like
nta-r.1	107811431	protein NRT1/ PTR FAMILY 5.10

Top 50 coexpressed genes to 8062441 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8062441 (sbi-r.1 coexpression data)

CoexMap"8062441"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006857 [list] [network] oligopeptide transport	(26 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(920 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(3172 genes)

IEA

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1159 genes)

IEA

Protein

XP_002456717.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, plas 2, nucl 1, E.R._plas 1, cyto_plas 1

(predict for XP_002456717.2)

Subcellular
localization
TargetP

mito 6, other 3

(predict for XP_002456717.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8062441	sbi-r.1 for 8060993	sbi-r.1 for 8055194	zma-u.5 for 100281589	zma-u.5 for 100381733	osa-u.5 for 112937603	osa-u.5 for 9270493	osa-u.5 for 112935994	tae-r.2 for 123062751	tae-r.2 for 123062749	tae-r.2 for 123182125	hvu-r.1 for 123446444	hvu-r.1 for 123440453	bdi-r.1 for 100831418	bdi-r.1 for 112270659	bdi-r.1 for 100824280	ath-u.5 for AT1G22540	ath-u.5 for AT1G22550	ath-u.5 for AT1G72120	gma-u.5 for 100782611	gma-u.5 for 100776720	sly-u.5 for 101256981	bra-r.6 for 103830813	bra-r.6 for 103830814	vvi-u.5 for 100854655	vvi-u.5 for 100254556	ppo-u.5 for 112326053	ppo-u.5 for 112325216	mtr-u.5 for 25480837	mtr-u.5 for 25491797	mtr-u.5 for 25491799	ghi-r.1 for 107910620	ghi-r.1 for 107895068	ghi-r.1 for 107920422	bna-r.1 for 106353761	sot-r.1 for 102597245	cit-r.1 for 102615398	cit-r.1 for 102615123	nta-r.1 for 107785416	nta-r.1 for 107791419	nta-r.1 for 107811431

Ortholog

Ortholog ID: 645

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

protein NRT1/ PTR FAMILY 5.10

Protein NRT1/ PTR FAMILY 5.10

uncharacterized LOC100502313

protein NRT1/ PTR FAMILY 5.10

protein NRT1/ PTR FAMILY 5.10-like

protein NRT1/ PTR FAMILY 5.16-like

protein NRT1/ PTR FAMILY 5.10

Major facilitator superfamily protein

protein NRT1/ PTR FAMILY 5.10

protein NRT1/ PTR FAMILY 5.11

protein NRT1/ PTR FAMILY 5.10

protein NRT1/ PTR FAMILY 5.16

protein NRT1/ PTR FAMILY 5.10

protein NRT1/ PTR FAMILY 5.16

protein NRT1/ PTR FAMILY 5.10-like

protein NRT1/ PTR FAMILY 5.10

protein NRT1/ PTR FAMILY 5.10-like

protein NRT1/ PTR FAMILY 5.10

protein NRT1/ PTR FAMILY 5.10-like

protein NRT1/ PTR FAMILY 5.10

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00062	Fatty acid elongation	6
sbi04626	Plant-pathogen interaction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	2
osa00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	3
tae00562	Inositol phosphate metabolism	2
tae00564	Glycerophospholipid metabolism	2
tae00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3
tae02010	ABC transporters	2
tae04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00260	Glycine, serine and threonine metabolism	2
bdi00310	Lysine degradation	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	9
gma00510	N-Glycan biosynthesis	5
gma00513	Various types of N-glycan biosynthesis	5
gma04145	Phagosome	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2
vvi01200	Carbon metabolism	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	3
mtr00240	Pyrimidine metabolism	2
mtr00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5
bna03015	mRNA surveillance pathway	2
bna00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04136	Autophagy - other	2
nta04075	Plant hormone signal transduction	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00071	Fatty acid degradation	2
nta00350	Tyrosine metabolism	2
nta00620	Pyruvate metabolism	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8062441

8060993

8055194

100381733

100502313

112937603

112935994

4324944

123134474

123089947

123134464

123444771

123444777

123444773

112270659

100824586

843543

843544

843545

100782611

100776720

101256981

103830813

100254556

104882761

7494433

25491797

25491799

11430201

107895068

107920422

107951288

106451248

106401283

106401282

102597245

102615398

102615123

107785416

107791419

107811431

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	3	3	2	3	3	2	1	2	2	2	3	3	1	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8062441 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8062441 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**