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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8063154   CLP protease regulatory subunit CLPX1, mitochondrial 
 zma-u.5   100281116   ATP-dependent Clp protease ATP-binding subunit clpX 
 zma-u.5   100275780   uncharacterized LOC100275780 
 zma-u.5   100272327   CLP protease regulatory subunit CLPX3 mitochondrial 
 osa-u.5   4329067   CLP protease regulatory subunit CLPX1, mitochondrial 
 osa-u.5   4329696   CLP protease regulatory subunit CLPX1, mitochondrial 
 osa-u.5   4324891   CLP protease regulatory subunit CLPX1, mitochondrial 
 ath-u.5   AT5G49840   ATP-dependent Clp protease 
 ath-u.5   CLPX   CLP protease regulatory subunit X 
 ath-u.5   AT1G33360   ATP-dependent Clp protease 
 gma-u.5   100818418   CLP protease regulatory subunit CLPX3, mitochondrial 
 gma-u.5   100816191   CLP protease regulatory subunit CLPX1, mitochondrial 
 gma-u.5   100810042   CLP protease regulatory subunit CLPX1, mitochondrial 
 sly-u.5   101259945   CLP protease regulatory subunit CLPX1, mitochondrial 
 sly-u.5   101258138   CLP protease regulatory subunit CLPX1, mitochondrial 
 sly-u.5   101255539   CLP protease regulatory subunit CLPX2, mitochondrial 
 vvi-u.5   100260864   CLP protease regulatory subunit CLPX2, mitochondrial 
 vvi-u.5   100264001   CLP protease regulatory subunit CLPX1, mitochondrial 
 vvi-u.5   100249902   CLP protease regulatory subunit CLPX3, mitochondrial 
 ppo-u.5   18104285   CLP protease regulatory subunit CLPX3, mitochondrial 
 ppo-u.5   18098372   CLP protease regulatory subunit CLPX3, mitochondrial 
 ppo-u.5   7464270   CLP protease regulatory subunit CLPX1, mitochondrial 
 mtr-u.5   11442898   CLP protease regulatory subunit CLPX1, mitochondrial 
 mtr-u.5   11441471   CLP protease regulatory subunit CLPX1, mitochondrial 

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Top 50 coexpressed genes to 8063154 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8063154 (sbi-r.1 coexpression data)

CoexMap"8063154"


sbiLOC8063154 | Entrez gene ID : 8063154      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006457 [list] [network] protein folding  (184 genes)  IEA  
GO:0030163 [list] [network] protein catabolic process  (366 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (765 genes)  IEA  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (73 genes)  IEA  
GO MF
GO:0140662 [list] [network] ATP-dependent protein folding chaperone  (59 genes)  IEA  
GO:0051082 [list] [network] unfolded protein binding  (124 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (434 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002458882.1 [sequence] [blastp]
XP_021312341.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_002458882.1)
chlo 7,  chlo_mito 5,  mito 2,  cyto_mito 1  (predict for XP_021312341.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002458882.1)
chlo 8,  mito 3  (predict for XP_021312341.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8063154

.
zma-u.5
for
100281116

.
zma-u.5
for
100275780

.
zma-u.5
for
100272327

.
osa-u.5
for
4329067

.
osa-u.5
for
4329696

.
osa-u.5
for
4324891

.
ath-u.5
for
AT5G49840

.
ath-u.5
for
CLPX

.
ath-u.5
for
AT1G33360

.
gma-u.5
for
100818418

.
gma-u.5
for
100816191

.
gma-u.5
for
100810042

.
sly-u.5
for
101259945

.
sly-u.5
for
101258138

.
sly-u.5
for
101255539

.
vvi-u.5
for
100260864

.
vvi-u.5
for
100264001

.
vvi-u.5
for
100249902

.
ppo-u.5
for
18104285

.
ppo-u.5
for
18098372

.
ppo-u.5
for
7464270

.
mtr-u.5
for
11442898

.
mtr-u.5
for
11441471

.


Ortholog ID: 1592
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G33360 CLPX LOC100810042 LOC100816191 LOC101255539 LOC101258138 LOC4324891 LOC4329067 LOC100281116 LOC100275780 LOC103840066 LOC103857083 LOC100260864 LOC100249902 LOC7464270 LOC18098372 LOC11441471 LOC11442898 LOC123071784 LOC123144528 LOC123406188 LOC123445102 LOC107909122 LOC107906309 LOC106387473 LOC106418194 CHLRE_16g663350v5 CHLRE_16g663280v5 LOC8072595 LOC8063154 LOC102602500 LOC102581121 LOC102622638 LOC102627049 LOC100828675 LOC100828710 LOC107794973 LOC107782431
Function* ATP-dependent Clp protease CLP protease regulatory subunit X CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial ATP-dependent Clp protease ATP-binding subunit clpX uncharacterized LOC100275780 CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial-like CLP protease regulatory subunit CLPX1, mitochondrial-like CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial uncharacterized protein uncharacterized protein CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial-like CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
mtr04016 MAPK signaling pathway - plant 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 4
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre00410 beta-Alanine metabolism 2
cre00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre00410 beta-Alanine metabolism 2
cre00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840230 835416 100810042 100816191 101255539 101258138 4324891 4329067 100281116 100275780 103840066 103857083 100260864 100249902 7464270 18098372 11441471 11442898 123071784 123144528 123406188 123445102 107909122 107906309 106387473 106418194 5723520 66056583 8072595 8063154 102602500 102581121 102622638 102627049 100828675 100828710 107794973 107782431
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