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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8063285   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 zma-u.5   103647916   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 osa-u.5   4350065   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 gma-u.5   100812370   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 mtr-u.5   25488485   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 

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Top 50 coexpressed genes to 8063285 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8063285 (sbi-r.1 coexpression data)

CoexMap"8063285"


sbiLOC8063285 | Entrez gene ID : 8063285    
Species sbi zma osa gma mtr sly bra nta cre vvi cit hvu ppo bdi sot tae ath bna ghi
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002443200.1 [sequence] [blastp]
XP_021301808.1 [sequence] [blastp]
XP_021301809.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 2,  mito_plas 2,  chlo 1,  vacu 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002443200.1)
mito 4,  cyto 2,  mito_plas 2,  chlo 1,  vacu 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_021301808.1)
mito 4,  cyto 2,  mito_plas 2,  chlo 1,  vacu 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_021301809.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_002443200.1)
mito 7  (predict for XP_021301808.1)
mito 7  (predict for XP_021301809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8063285

.
zma-u.5
for
103647916

.
osa-u.5
for
4350065

.
gma-u.5
for
100812370

.
mtr-u.5
for
25488485

.


Ortholog ID: 14445
Species gma osa zma mtr tae hvu sbi bdi
Symbol LOC100812370 LOC4350065 LOC103647916 LOC25488485 LOC123096352 LOC123447883 LOC8063285 LOC100831064
Function* pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770-like pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g12770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100812370 4350065 103647916 25488485 123096352 123447883 8063285 100831064
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