ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8064620	uncharacterized LOC8064620
zma-u.5	100216720	uncharacterized LOC100216720
zma-u.5	100275620	uncharacterized LOC100275620
osa-u.5	4352388	uncharacterized LOC4352388
tae-r.2	123119865	uncharacterized LOC123119865
tae-r.2	123110852	uncharacterized LOC123110852
tae-r.2	123102668	uncharacterized LOC123102668
hvu-r.1	123452473	uncharacterized LOC123452473
bdi-r.1	100838408	uncharacterized LOC100838408
ath-u.5	AT3G52170	DNA binding protein
gma-u.5	100791460	uncharacterized LOC100791460
gma-u.5	100778620	uncharacterized LOC100778620
sly-u.5	101259105	probable GPI-anchored adhesin-like protein PGA55
bra-r.6	103860748	uncharacterized LOC103860748
vvi-u.5	100249674	uncharacterized LOC100249674
ppo-u.5	18101336	uncharacterized LOC18101336
ppo-u.5	112328771	uncharacterized LOC112328771
mtr-u.5	25484852	uncharacterized LOC25484852
ghi-r.1	107943609	uncharacterized LOC107943609
ghi-r.1	107922513	uncharacterized LOC107922513
bna-r.1	106448453	uncharacterized LOC106448453
bna-r.1	106390714	uncharacterized LOC106390714
bna-r.1	106445674	uncharacterized LOC106445674
sot-r.1	102588960	uncharacterized LOC102588960
cit-r.1	102619025	uncharacterized LOC102619025
nta-r.1	107812931	uncharacterized LOC107812931
nta-r.1	107801062	uncharacterized LOC107801062

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002443272.1 [sequence] [blastp]
XP_021321904.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 2	(predict for XP_002443272.1)
chlo 7, vacu 3	(predict for XP_021321904.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_002443272.1)
chlo 8	(predict for XP_021321904.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8064620	zma-u.5 for 100216720	zma-u.5 for 100275620	osa-u.5 for 4352388	tae-r.2 for 123119865	tae-r.2 for 123110852	tae-r.2 for 123102668	hvu-r.1 for 123452473	bdi-r.1 for 100838408	ath-u.5 for AT3G52170	gma-u.5 for 100791460	gma-u.5 for 100778620	sly-u.5 for 101259105	bra-r.6 for 103860748	vvi-u.5 for 100249674	ppo-u.5 for 18101336	ppo-u.5 for 112328771	mtr-u.5 for 25484852	ghi-r.1 for 107943609	ghi-r.1 for 107922513	bna-r.1 for 106448453	bna-r.1 for 106390714	bna-r.1 for 106445674	sot-r.1 for 102588960	cit-r.1 for 102619025	nta-r.1 for 107812931	nta-r.1 for 107801062

Ortholog

Ortholog ID: 8980

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC8064620

uncharacterized LOC100216720

uncharacterized LOC100275620

uncharacterized LOC4352388

uncharacterized LOC123119865

uncharacterized LOC123110852

uncharacterized LOC123102668

uncharacterized LOC123452473

uncharacterized LOC100838408

DNA binding protein

uncharacterized LOC100791460

uncharacterized LOC100778620

probable GPI-anchored adhesin-like protein PGA55

uncharacterized LOC103860748

uncharacterized LOC100249674

uncharacterized LOC18101336

uncharacterized LOC112328771

uncharacterized LOC25484852

uncharacterized LOC107943609

uncharacterized LOC107922513

uncharacterized LOC106448453

uncharacterized LOC106390714

uncharacterized LOC106445674

uncharacterized LOC102588960

uncharacterized LOC102619025

uncharacterized LOC107812931

uncharacterized LOC107801062

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma03040	Spliceosome	3
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3
zma04141	Protein processing in endoplasmic reticulum	2
zma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00620	Pyruvate metabolism	3
osa01230	Biosynthesis of amino acids	3
osa00061	Fatty acid biosynthesis	3
osa01212	Fatty acid metabolism	3
osa00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00061	Fatty acid biosynthesis	2
bdi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi00860	Porphyrin metabolism	2
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	5
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	7
bna00250	Alanine, aspartate and glutamate metabolism	7
bna01232	Nucleotide metabolism	7
bna01240	Biosynthesis of cofactors	7
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	7
bna00250	Alanine, aspartate and glutamate metabolism	7
bna01232	Nucleotide metabolism	7
bna01240	Biosynthesis of cofactors	7
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	7
bna00250	Alanine, aspartate and glutamate metabolism	7
bna01232	Nucleotide metabolism	7
bna01240	Biosynthesis of cofactors	7
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03020	RNA polymerase	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

8064620

100216720

100275620

4352388

123119865

123110852

123102668

123452473

100838408

824382

100791460

100778620

101259105

103860748

100249674

18101336

112328771

25484852

107943609

107922513

106448453

106390714

106445674

102588960

102619025

107812931

107801062

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8064620 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8064620 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	2	1	3	1	1	1	2	1	1	1	2	1	2	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8064620 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8064620 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**