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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065207   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 zma-u.5   100278278   uncharacterized LOC100278278 
 osa-u.5   4343805   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 ath-u.5   AT4G21705   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100805658   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 gma-u.5   100804385   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 sly-u.5   101253400   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 sly-u.5   101246213   pentatricopeptide repeat-containing protein 
 vvi-u.5   100262431   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 vvi-u.5   100265843   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 ppo-u.5   18103013   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 ppo-u.5   7456800   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 mtr-u.5   25501236   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 
 mtr-u.5   11423940   pentatricopeptide repeat-containing protein At4g21705, mitochondrial 

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Top 50 coexpressed genes to 8065207 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065207 (sbi-r.1 coexpression data)

CoexMap"8065207"


sbiLOC8065207 | Entrez gene ID : 8065207      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002464423.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_002464423.2)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_002464423.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065207

.
zma-u.5
for
100278278

.
osa-u.5
for
4343805

.
ath-u.5
for
AT4G21705

.
gma-u.5
for
100805658

.
gma-u.5
for
100804385

.
sly-u.5
for
101253400

.
sly-u.5
for
101246213

.
vvi-u.5
for
100262431

.
vvi-u.5
for
100265843

.
ppo-u.5
for
18103013

.
ppo-u.5
for
7456800

.
mtr-u.5
for
25501236

.
mtr-u.5
for
11423940

.


Ortholog ID: 5553
Species ath gma gma sly sly osa zma vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol AT4G21705 LOC100805658 LOC100804385 LOC101246213 LOC101253400 LOC4343805 LOC100278278 LOC100262431 LOC100265843 LOC7456800 LOC25501236 LOC11423940 LOC123047205 LOC123123016 LOC123433161 LOC107944713 LOC107925307 LOC106420823 LOC106397648 LOC8065573 LOC8065574 LOC102586937 LOC102595648 LOC102629903 LOC102620482 LOC100839837 LOC107806993 LOC107787282
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial uncharacterized LOC100278278 pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa03440 Homologous recombination 2
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00261 Monobactam biosynthesis 2
zma00300 Lysine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 3
mtr03018 RNA degradation 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828258 100805658 100804385 101246213 101253400 4343805 100278278 100262431 100265843 7456800 25501236 11423940 123047205 123123016 123433161 107944713 107925307 106420823 106397648 8065573 8065574 102586937 102595648 102629903 102620482 100839837 107806993 107787282
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