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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8066528   putative pentatricopeptide repeat-containing protein At5g40405 
 zma-u.5   103627279   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 osa-u.5   4329637   pentatricopeptide repeat-containing protein At3g62890 

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Top 50 coexpressed genes to 8066528 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8066528 (sbi-r.1 coexpression data)

CoexMap"8066528"


sbiLOC8066528 | Entrez gene ID : 8066528      
Species sbi zma osa sly bna ghi gma nta mtr cre bra cit vvi ppo hvu bdi sot tae ath
Paralog 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002452256.1 [sequence] [blastp]
XP_021315552.1 [sequence] [blastp]
XP_021315553.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002452256.1)
chlo 8,  mito 1  (predict for XP_021315552.1)
chlo 8,  mito 1  (predict for XP_021315553.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_002452256.1)
mito 5  (predict for XP_021315552.1)
mito 5  (predict for XP_021315553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8066528

.
zma-u.5
for
103627279

.
osa-u.5
for
4329637

.


Ortholog ID: 18324
Species osa zma tae tae sbi bdi
Symbol LOC4329637 LOC103627279 LOC123112709 LOC123104399 LOC8066528 LOC100826251
Function* pentatricopeptide repeat-containing protein At3g62890 pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic putative pentatricopeptide repeat-containing protein At5g40405 pentatricopeptide repeat-containing protein At5g06540
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4329637 103627279 123112709 123104399 8066528 100826251
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