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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8066598   D-glycerate 3-kinase, chloroplastic 
 zma-u.5   100274052   uncharacterized LOC100274052 
 zma-u.5   103651345   D-glycerate 3-kinase, chloroplastic-like 
 osa-u.5   4324401   D-glycerate 3-kinase, chloroplastic 
 ath-u.5   AT1G80380   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100820573   D-glycerate 3-kinase, chloroplastic 
 gma-u.5   100806896   D-glycerate 3-kinase, chloroplastic-like 
 sly-u.5   101244755   D-glycerate 3-kinase, chloroplastic 
 vvi-u.5   100253144   D-glycerate 3-kinase, chloroplastic 
 ppo-u.5   7490980   D-glycerate 3-kinase, chloroplastic 
 ppo-u.5   18096853   D-glycerate 3-kinase, chloroplastic 
 mtr-u.5   11436362   D-glycerate 3-kinase, chloroplastic 

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Top 50 coexpressed genes to 8066598 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8066598 (sbi-r.1 coexpression data)

CoexMap"8066598"


sbiLOC8066598 | Entrez gene ID : 8066598      
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 2 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
sbi00561 [list] [network] Glycerolipid metabolism (95 genes)
sbi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (73 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
GO BP
GO:0009853 [list] [network] photorespiration  (3 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0016301 [list] [network] kinase activity  (1438 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002439104.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002439104.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002439104.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8066598

.
zma-u.5
for
100274052

.
zma-u.5
for
103651345

.
osa-u.5
for
4324401

.
ath-u.5
for
AT1G80380

.
gma-u.5
for
100820573

.
gma-u.5
for
100806896

.
sly-u.5
for
101244755

.
vvi-u.5
for
100253144

.
ppo-u.5
for
7490980

.
ppo-u.5
for
18096853

.
mtr-u.5
for
11436362

.


Ortholog ID: 5639
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT1G80380 LOC100820573 LOC100806896 LOC101244755 LOC4324401 LOC103651345 LOC100274052 LOC103830434 LOC103832491 LOC100253144 LOC7490980 LOC18096853 LOC11436362 LOC123078962 LOC123070552 LOC123444126 LOC107949570 LOC107940949 LOC106398485 LOC125586218 CHLRE_12g542300v5 LOC8066598 LOC8061877 LOC102598451 LOC102631190 LOC100840924 LOC107815070 LOC107763687
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like uncharacterized LOC100274052 D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like uncharacterized protein D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic D-glycerate 3-kinase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath01210 2-Oxocarboxylic acid metabolism 5
ath01200 Carbon metabolism 5
ath00640 Propanoate metabolism 4
ath00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00500 Starch and sucrose metabolism 2
gma00230 Purine metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00561 Glycerolipid metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00030 Pentose phosphate pathway 2
sly00710 Carbon fixation by Calvin cycle 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 8
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 5
osa01230 Biosynthesis of amino acids 3
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00620 Pyruvate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 6
zma01200 Carbon metabolism 3
zma00260 Glycine, serine and threonine metabolism 2
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00030 Pentose phosphate pathway 2
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 7
vvi00710 Carbon fixation by Calvin cycle 4
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00195 Photosynthesis 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 5
tae00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 6
tae00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00260 Glycine, serine and threonine metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00270 Cysteine and methionine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna00561 Glycerolipid metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna00561 Glycerolipid metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
bna01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00630 Glyoxylate and dicarboxylate metabolism 5
cre01200 Carbon metabolism 5
cre00260 Glycine, serine and threonine metabolism 4
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00710 Carbon fixation by Calvin cycle 6
sot01230 Biosynthesis of amino acids 5
sot00010 Glycolysis / Gluconeogenesis 4
sot00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00710 Carbon fixation by Calvin cycle 2
bdi01230 Biosynthesis of amino acids 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844378 100820573 100806896 101244755 4324401 103651345 100274052 103830434 103832491 100253144 7490980 18096853 11436362 123078962 123070552 123444126 107949570 107940949 106398485 125586218 5719520 8066598 8061877 102598451 102631190 100840924 107815070 107763687
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