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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8068084   ATP-citrate synthase alpha chain protein 3 
 zma-u.5   100273868   uncharacterized LOC100273868 
 zma-u.5   100282948   ATP-citrate synthase 
 osa-u.5   9272485   ATP-citrate synthase subunit alpha chain protein 1-like 
 osa-u.5   9272295   ATP-citrate synthase alpha chain protein 2-like 
 osa-u.5   4352549   ATP-citrate synthase alpha chain protein 3-like 
 ath-u.5   ACLA-3   ATP-citrate lyase A-3 
 ath-u.5   ACLA-1   ATP-citrate lyase A-1 
 ath-u.5   ACLA-2   ATP-citrate lyase A-2 
 gma-u.5   100787121   ATP-citrate synthase alpha chain protein 1 
 gma-u.5   100787551   ATP-citrate synthase alpha chain protein 2 
 sly-u.5   101246135   ATP-citrate synthase alpha chain protein 2 
 sly-u.5   101258745   ATP-citrate synthase alpha chain protein 2 
 sly-u.5   101261460   ATP-citrate synthase alpha chain protein 3 
 vvi-u.5   100255189   ATP-citrate synthase alpha chain protein 1 
 vvi-u.5   100240939   ATP-citrate synthase alpha chain protein 2 
 ppo-u.5   7465221   ATP-citrate synthase alpha chain protein 2 
 ppo-u.5   7469058   ATP-citrate synthase alpha chain protein 2 
 ppo-u.5   18098488   ATP-citrate synthase alpha chain protein 2 
 mtr-u.5   11407101   ATP-citrate synthase alpha chain protein 1 
 mtr-u.5   11425415   ATP-citrate synthase alpha chain protein 2 

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Top 50 coexpressed genes to 8068084 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068084 (sbi-r.1 coexpression data)

CoexMap"8068084"


sbiLOC8068084 | Entrez gene ID : 8068084      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 3 3 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00020 [list] [network] Citrate cycle (TCA cycle) (53 genes)
GO BP
GO:0006104 [list] [network] succinyl-CoA metabolic process  (3 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (46 genes)  IEA  
GO CC
GO:0042709 [list] [network] succinate-CoA ligase complex  (4 genes)  IEA  
GO MF
GO:0004775 [list] [network] succinate-CoA ligase (ADP-forming) activity  (4 genes)  IEA  
Protein XP_002442337.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 2  (predict for XP_002442337.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_002442337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8068084

.
zma-u.5
for
100273868

.
zma-u.5
for
100282948

.
osa-u.5
for
9272485

.
osa-u.5
for
9272295

.
osa-u.5
for
4352549

.
ath-u.5
for
ACLA-3

.
ath-u.5
for
ACLA-1

.
ath-u.5
for
ACLA-2

.
gma-u.5
for
100787121

.
gma-u.5
for
100787551

.
sly-u.5
for
101246135

.
sly-u.5
for
101258745

.
sly-u.5
for
101261460

.
vvi-u.5
for
100255189

.
vvi-u.5
for
100240939

.
ppo-u.5
for
7465221

.
ppo-u.5
for
7469058

.
ppo-u.5
for
18098488

.
mtr-u.5
for
11407101

.
mtr-u.5
for
11425415

.


Ortholog ID: 2181
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol ACLA-3 ACLA-2 LOC100818180 LOC101261460 LOC101246135 LOC4352549 LOC9272485 LOC100282948 LOC100273868 LOC103838482 LOC103868078 LOC100240939 LOC100255189 LOC7469058 LOC7465221 LOC11425415 LOC11407101 LOC123110723 LOC123102535 LOC123448291 LOC123395561 LOC107927299 LOC107898661 LOC106412078 LOC106452543 CHLRE_05g241850v5 LOC8068084 LOC8086010 LOC102595393 LOC102585745 LOC102626909 LOC102608248 LOC100845535 LOC100839155 LOC107787579 LOC107776338
Function* ATP-citrate lyase A-3 ATP-citrate lyase A-2 ATP-citrate synthase alpha chain protein 1-like ATP-citrate synthase alpha chain protein 3 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 3-like ATP-citrate synthase subunit alpha chain protein 1-like ATP-citrate synthase uncharacterized LOC100273868 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 1 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 1 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 1 ATP-citrate synthase alpha chain protein 3 ATP-citrate synthase alpha chain protein 3 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 3 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 1 ATP-citrate synthase alpha chain protein 1-like ATP-citrate synthase alpha chain protein 2 uncharacterized protein ATP-citrate synthase alpha chain protein 3 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 2-like ATP-citrate synthase alpha chain protein 1 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 3 ATP-citrate synthase alpha chain protein 2 ATP-citrate synthase alpha chain protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00640 Propanoate metabolism 4
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 5
ath00020 Citrate cycle (TCA cycle) 4
ath00100 Steroid biosynthesis 3
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
gma01230 Biosynthesis of amino acids 7
gma00020 Citrate cycle (TCA cycle) 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00520 Amino sugar and nucleotide sugar metabolism 3
sly01250 Biosynthesis of nucleotide sugars 3
sly01240 Biosynthesis of cofactors 3
sly00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 7
sly01200 Carbon metabolism 4
sly00280 Valine, leucine and isoleucine degradation 3
sly00650 Butanoate metabolism 3
sly00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa01230 Biosynthesis of amino acids 8
osa00010 Glycolysis / Gluconeogenesis 7
osa00710 Carbon fixation by Calvin cycle 6
osa04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00020 Citrate cycle (TCA cycle) 3
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 6
zma00020 Citrate cycle (TCA cycle) 5
zma01200 Carbon metabolism 4
zma00270 Cysteine and methionine metabolism 3
zma00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01250 Biosynthesis of nucleotide sugars 5
zma00020 Citrate cycle (TCA cycle) 4
zma00541 Biosynthesis of various nucleotide sugars 3
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
bra04145 Phagosome 2
bra04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00020 Citrate cycle (TCA cycle) 4
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 10
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
vvi01200 Carbon metabolism 4
vvi00020 Citrate cycle (TCA cycle) 2
vvi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 9
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
vvi00010 Glycolysis / Gluconeogenesis 3
vvi01200 Carbon metabolism 3
vvi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo01230 Biosynthesis of amino acids 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00900 Terpenoid backbone biosynthesis 3
ppo00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 7
ppo01200 Carbon metabolism 6
ppo01230 Biosynthesis of amino acids 6
ppo00020 Citrate cycle (TCA cycle) 4
ppo00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 7
mtr00020 Citrate cycle (TCA cycle) 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 8
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
mtr00020 Citrate cycle (TCA cycle) 3
mtr01200 Carbon metabolism 3
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 12
tae00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 12
tae00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00670 One carbon pool by folate 4
hvu00270 Cysteine and methionine metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu01240 Biosynthesis of cofactors 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 3
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00230 Purine metabolism 2
ghi00730 Thiamine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00510 N-Glycan biosynthesis 6
cre00513 Various types of N-glycan biosynthesis 6
cre04141 Protein processing in endoplasmic reticulum 6
cre00020 Citrate cycle (TCA cycle) 4
cre00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 5
sbi00270 Cysteine and methionine metabolism 3
sbi00020 Citrate cycle (TCA cycle) 3
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 7
sbi01230 Biosynthesis of amino acids 3
sbi00020 Citrate cycle (TCA cycle) 3
sbi00270 Cysteine and methionine metabolism 2
sbi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 5
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 5
sot00020 Citrate cycle (TCA cycle) 5
sot00620 Pyruvate metabolism 4
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 3
bdi00062 Fatty acid elongation 3
bdi01040 Biosynthesis of unsaturated fatty acids 3
bdi01212 Fatty acid metabolism 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi01200 Carbon metabolism 5
bdi00670 One carbon pool by folate 5
bdi00020 Citrate cycle (TCA cycle) 3
bdi00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 6
nta00010 Glycolysis / Gluconeogenesis 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 12
nta00020 Citrate cycle (TCA cycle) 6
nta00280 Valine, leucine and isoleucine degradation 4
nta00650 Butanoate metabolism 4
nta00071 Fatty acid degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837466 842375 100818180 101261460 101246135 4352549 9272485 100282948 100273868 103838482 103868078 100240939 100255189 7469058 7465221 11425415 11407101 123110723 123102535 123448291 123395561 107927299 107898661 106412078 106452543 5726448 8068084 8086010 102595393 102585745 102626909 102608248 100845535 100839155 107787579 107776338
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