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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8068518  pentatricopeptide repeat-containing protein At2g33760 
 zma-u.5  103628932  pentatricopeptide repeat-containing protein At2g33760 
 osa-u.5  4351677  pentatricopeptide repeat-containing protein At2g33760 
 gma-u.5  100809199  pentatricopeptide repeat-containing protein At2g33760 
 gma-u.5  100791321  pentatricopeptide repeat-containing protein At2g33760 
 vvi-u.5  100855391  pentatricopeptide repeat-containing protein At2g33760 
 ppo-u.5  7456795  pentatricopeptide repeat-containing protein At2g33760 

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Top 50 coexpressed genes to 8068518 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068518 (sbi-r.1 coexpression data)

CoexMap"8068518"


sbiLOC8068518 | Entrez gene ID : 8068518
Species sbi zma osa gma vvi ppo sly bra nta mtr cre hvu cit bdi sot tae ath bna ghi
Paralog 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002444875.1 [sequence] [blastp]
XP_021320159.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  E.R. 3,  cyto_E.R. 3  (predict for XP_002444875.1)
chlo 4,  cyto 3,  E.R. 3,  cyto_E.R. 3  (predict for XP_021320159.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002444875.1)
other 7  (predict for XP_021320159.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8068518

.

zma-u.5
for
103628932

.

osa-u.5
for
4351677

.

gma-u.5
for
100809199

.

gma-u.5
for
100791321

.

vvi-u.5
for
100855391

.

ppo-u.5
for
7456795

.


Ortholog ID: 12185
Species gma gma osa zma bra vvi ppo hvu ghi ghi bna bna sbi cit bdi
Symbol LOC100791321 LOC100809199 LOC4351677 LOC103628932 LOC103865424 LOC100855391 LOC7456795 LOC123444466 LOC107901723 LOC107893656 LOC106423069 LOC106447194 LOC8068518 LOC112497267 LOC100826760
Function* pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760-like pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760-like pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03020 RNA polymerase 2
hvu03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100791321 100809199 4351677 103628932 103865424 100855391 7456795 123444466 107901723 107893656 106423069 106447194 8068518 112497267 100826760
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