ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8069336	lysosomal Pro-X carboxypeptidase
sbi-r.1	8058418	lysosomal Pro-X carboxypeptidase
zma-u.5	100274448	putative serine peptidase S28 family protein
zma-u.5	100217003	uncharacterized LOC100217003
zma-u.5	103638817	lysosomal Pro-X carboxypeptidase
osa-u.5	4325498	uncharacterized LOC4325498
osa-u.5	4341667	lysosomal Pro-X carboxypeptidase
tae-r.2	123172305	lysosomal Pro-X carboxypeptidase
tae-r.2	123149480	lysosomal Pro-X carboxypeptidase
tae-r.2	123169771	lysosomal Pro-X carboxypeptidase-like
hvu-r.1	123407301	lysosomal Pro-X carboxypeptidase-like
hvu-r.1	123407303	lysosomal Pro-X carboxypeptidase-like
hvu-r.1	123444505	lysosomal Pro-X carboxypeptidase
bdi-r.1	100836531	lysosomal Pro-X carboxypeptidase
bdi-r.1	100836646	lysosomal Pro-X carboxypeptidase
ath-u.5	AT2G24280	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT5G65760	Serine carboxypeptidase S28 family protein
gma-u.5	100781698	lysosomal Pro-X carboxypeptidase
gma-u.5	100803257	lysosomal Pro-X carboxypeptidase
gma-u.5	100804985	lysosomal Pro-X carboxypeptidase
sly-u.5	101259262	uncharacterized LOC101259262
sly-u.5	101244702	uncharacterized LOC101244702
sly-u.5	101246394	uncharacterized LOC101246394
bra-r.6	103852179	lysosomal Pro-X carboxypeptidase
bra-r.6	103874015	lysosomal Pro-X carboxypeptidase
bra-r.6	103864533	lysosomal Pro-X carboxypeptidase
vvi-u.5	100853380	uncharacterized LOC100853380
vvi-u.5	100261134	uncharacterized LOC100261134
vvi-u.5	100252778	uncharacterized LOC100252778
ppo-u.5	7497728	uncharacterized LOC7497728
ppo-u.5	7493410	uncharacterized LOC7493410
ppo-u.5	7492235	uncharacterized LOC7492235
mtr-u.5	25493542	lysosomal Pro-X carboxypeptidase
mtr-u.5	25499422	lysosomal Pro-X carboxypeptidase
ghi-r.1	107950521	lysosomal Pro-X carboxypeptidase
ghi-r.1	107935273	lysosomal Pro-X carboxypeptidase
ghi-r.1	107928126	lysosomal Pro-X carboxypeptidase
bna-r.1	125608008	lysosomal Pro-X carboxypeptidase-like
bna-r.1	106348095	lysosomal Pro-X carboxypeptidase
bna-r.1	106348183	lysosomal Pro-X carboxypeptidase
sot-r.1	102597170	lysosomal Pro-X carboxypeptidase
sot-r.1	102586762	lysosomal Pro-X carboxypeptidase-like
sot-r.1	102582166	lysosomal Pro-X carboxypeptidase-like
cit-r.1	102613309	uncharacterized LOC102613309
cit-r.1	102631380	uncharacterized LOC102631380
nta-r.1	107773352	uncharacterized LOC107773352
nta-r.1	107781733	uncharacterized LOC107781733
nta-r.1	107796017	uncharacterized LOC107796017
cre-r.1	CHLRE_10g422150v5	uncharacterized protein
cre-r.1	CHLRE_13g567650v5	uncharacterized protein

Top 50 coexpressed genes to 8069336 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8069336 (sbi-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

lysosomal Pro-X carboxypeptidase

KEGG

GO BP

GO:0006508 [list] [network] proteolysis

(765 genes)

IEA

GO CC

GO MF

GO:0008239 [list] [network] dipeptidyl-peptidase activity	(9 genes)	IEA
GO:0070008 [list] [network] serine-type exopeptidase activity	(60 genes)	IEA

Protein

XP_021304677.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, extr 1

(predict for XP_021304677.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_021304677.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8069336	sbi-r.1 for 8058418	zma-u.5 for 100274448	zma-u.5 for 100217003	zma-u.5 for 103638817	osa-u.5 for 4325498	osa-u.5 for 4341667	tae-r.2 for 123172305	tae-r.2 for 123149480	tae-r.2 for 123169771	hvu-r.1 for 123407301	hvu-r.1 for 123407303	hvu-r.1 for 123444505	bdi-r.1 for 100836531	bdi-r.1 for 100836646	ath-u.5 for AT2G24280	ath-u.5 for AT5G65760	gma-u.5 for 100781698	gma-u.5 for 100803257	gma-u.5 for 100804985	sly-u.5 for 101259262	sly-u.5 for 101244702	sly-u.5 for 101246394	bra-r.6 for 103852179	bra-r.6 for 103874015	bra-r.6 for 103864533	vvi-u.5 for 100853380	vvi-u.5 for 100261134	vvi-u.5 for 100252778	ppo-u.5 for 7497728	ppo-u.5 for 7493410	ppo-u.5 for 7492235	mtr-u.5 for 25493542	mtr-u.5 for 25499422	ghi-r.1 for 107950521	ghi-r.1 for 107935273	ghi-r.1 for 107928126	bna-r.1 for 125608008	bna-r.1 for 106348095	bna-r.1 for 106348183	sot-r.1 for 102597170	sot-r.1 for 102586762	sot-r.1 for 102582166	cit-r.1 for 102613309	cit-r.1 for 102631380	nta-r.1 for 107773352	nta-r.1 for 107781733	nta-r.1 for 107796017	cre-r.1 for CHLRE_10g422150v5	cre-r.1 for CHLRE_13g567650v5

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Ortholog

Ortholog ID: 1194

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

lysosomal Pro-X carboxypeptidase

putative serine peptidase S28 family protein

lysosomal Pro-X carboxypeptidase

uncharacterized LOC4325498

lysosomal Pro-X carboxypeptidase

lysosomal Pro-X carboxypeptidase-like

lysosomal Pro-X carboxypeptidase

alpha/beta-Hydrolases superfamily protein

Serine carboxypeptidase S28 family protein

lysosomal Pro-X carboxypeptidase

uncharacterized LOC101259262

uncharacterized LOC101244702

uncharacterized LOC101246394

lysosomal Pro-X carboxypeptidase

uncharacterized LOC100853380

uncharacterized LOC100261134

uncharacterized LOC100252778

uncharacterized LOC7497728

uncharacterized LOC7493410

uncharacterized LOC7492235

lysosomal Pro-X carboxypeptidase

lysosomal Pro-X carboxypeptidase-like

lysosomal Pro-X carboxypeptidase

lysosomal Pro-X carboxypeptidase-like

uncharacterized LOC102613309

uncharacterized LOC102631380

uncharacterized LOC107773352

uncharacterized LOC107781733

uncharacterized LOC107796017

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	4
sbi01230	Biosynthesis of amino acids	4
sbi00010	Glycolysis / Gluconeogenesis	3
sbi03018	RNA degradation	2
sbi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	5
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2
sbi00071	Fatty acid degradation	2
sbi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa00350	Tyrosine metabolism	2
osa00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	3
ath00270	Cysteine and methionine metabolism	2
ath00260	Glycine, serine and threonine metabolism	2
ath00280	Valine, leucine and isoleucine degradation	2
ath00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	3
gma01200	Carbon metabolism	3
gma00051	Fructose and mannose metabolism	2
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	5
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	2
bra01210	2-Oxocarboxylic acid metabolism	2
bra01230	Biosynthesis of amino acids	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	4
vvi00860	Porphyrin metabolism	3
vvi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2
ppo03015	mRNA surveillance pathway	2
ppo04136	Autophagy - other	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00220	Arginine biosynthesis	4
bna01210	2-Oxocarboxylic acid metabolism	4
bna01230	Biosynthesis of amino acids	4
bna00062	Fatty acid elongation	2
bna01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03440	Homologous recombination	2
sot03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	2
nta00500	Starch and sucrose metabolism	2
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta00030	Pentose phosphate pathway	2
nta00480	Glutathione metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04075	Plant hormone signal transduction	2
nta00030	Pentose phosphate pathway	2
nta00480	Glutathione metabolism	2
nta01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

8058418

8079258

100274448

103638817

4325498

4341667

123163952

123407301

123444505

100836531

100836646

816963

836705

100781698

100804985

101259262

101244702

101246394

103852179

103874015

103864533

100853380

100261134

100252778

7497728

7493410

7492235

25493542

25499422

107935273

107928126

107925523

125608008

106348095

106446636

102597170

102586762

102582166

102613309

102631380

107773352

107781733

107796017

5728251

5719076

The preparation time of this page was 0.4 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	3	3	2	2	3	3	3	3	3	2	3	3	3	2	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8069336 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8069336 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**