ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8069618	putative glycerol-3-phosphate transporter 1
sbi-r.1	110434539	putative glycerol-3-phosphate transporter 4
sbi-r.1	8083383	putative glycerol-3-phosphate transporter 1
sbi-r.1	8065403	putative glycerol-3-phosphate transporter 5
zma-u.5	100281746	glycerol 3-phosphate permease
zma-u.5	100216884	Putative glycerol-3-phosphate transporter 1
zma-u.5	100191817	Putative glycerol-3-phosphate transporter 4
osa-u.5	4344694	putative glycerol-3-phosphate transporter 1
osa-u.5	4340305	putative glycerol-3-phosphate transporter 5
osa-u.5	4336618	putative glycerol-3-phosphate transporter 1
tae-r.2	123161489	putative glycerol-3-phosphate transporter 1
tae-r.2	123147318	putative glycerol-3-phosphate transporter 1
tae-r.2	123147537	putative glycerol-3-phosphate transporter 5
hvu-r.1	123410812	putative glycerol-3-phosphate transporter 5
bdi-r.1	100841944	putative glycerol-3-phosphate transporter 4
bdi-r.1	100840645	putative glycerol-3-phosphate transporter 1
ath-u.5	G3Pp5	Major facilitator superfamily protein
ath-u.5	G3Pp1	putative glycerol-3-phosphate transporter 1
ath-u.5	G3Pp4	Major facilitator superfamily protein
gma-u.5	100813689	putative glycerol-3-phosphate transporter 5
gma-u.5	100795072	putative glycerol-3-phosphate transporter 1-like
gma-u.5	100799211	putative glycerol-3-phosphate transporter 1
sly-u.5	101249891	putative glycerol-3-phosphate transporter 5
sly-u.5	101248108	putative glycerol-3-phosphate transporter 1
sly-u.5	101245070	putative glycerol-3-phosphate transporter 4
bra-r.6	103833432	putative glycerol-3-phosphate transporter 3
bra-r.6	103845993	putative glycerol-3-phosphate transporter 5
vvi-u.5	100251916	putative glycerol-3-phosphate transporter 4
vvi-u.5	100248238	putative glycerol-3-phosphate transporter 5
vvi-u.5	100258691	putative glycerol-3-phosphate transporter 1
ppo-u.5	7465506	putative glycerol-3-phosphate transporter 1
ppo-u.5	7489481	putative glycerol-3-phosphate transporter 5
mtr-u.5	25493603	putative glycerol-3-phosphate transporter 4
mtr-u.5	25479454	putative glycerol-3-phosphate transporter 1
mtr-u.5	25488377	putative glycerol-3-phosphate transporter 5
ghi-r.1	107947350	putative glycerol-3-phosphate transporter 1
ghi-r.1	107953640	putative glycerol-3-phosphate transporter 1
ghi-r.1	107901350	putative glycerol-3-phosphate transporter 5
bna-r.1	106360830	putative glycerol-3-phosphate transporter 4
bna-r.1	106368878	putative glycerol-3-phosphate transporter 5
bna-r.1	106375307	putative glycerol-3-phosphate transporter 2
sot-r.1	102585522	putative glycerol-3-phosphate transporter 1
sot-r.1	102584176	putative glycerol-3-phosphate transporter 5
sot-r.1	102598088	putative glycerol-3-phosphate transporter 1
cit-r.1	102630400	putative glycerol-3-phosphate transporter 1
cit-r.1	102607243	putative glycerol-3-phosphate transporter 4
cit-r.1	102615792	putative glycerol-3-phosphate transporter 5
nta-r.1	107776389	putative glycerol-3-phosphate transporter 1
nta-r.1	107773549	putative glycerol-3-phosphate transporter 5
nta-r.1	107785276	putative glycerol-3-phosphate transporter 4
cre-r.1	CHLRE_12g503000v5	uncharacterized protein

Top 50 coexpressed genes to 8069618 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8069618 (sbi-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

putative glycerol-3-phosphate transporter 1

KEGG

GO BP

GO:0055062 [list] [network] phosphate ion homeostasis	(4 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(920 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(3172 genes)

IEA

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1159 genes)

IEA

Protein

XP_002443886.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, vacu 1, mito 1, plas 1, E.R._vacu 1, mito_plas 1

(predict for XP_002443886.1)

Subcellular
localization
TargetP

mito 6, other 3

(predict for XP_002443886.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8069618	sbi-r.1 for 110434539	sbi-r.1 for 8083383	sbi-r.1 for 8065403	zma-u.5 for 100281746	zma-u.5 for 100216884	zma-u.5 for 100191817	osa-u.5 for 4344694	osa-u.5 for 4340305	osa-u.5 for 4336618	tae-r.2 for 123161489	tae-r.2 for 123147318	tae-r.2 for 123147537	hvu-r.1 for 123410812	bdi-r.1 for 100841944	bdi-r.1 for 100840645	ath-u.5 for G3Pp5	ath-u.5 for G3Pp1	ath-u.5 for G3Pp4	gma-u.5 for 100813689	gma-u.5 for 100795072	gma-u.5 for 100799211	sly-u.5 for 101249891	sly-u.5 for 101248108	sly-u.5 for 101245070	bra-r.6 for 103833432	bra-r.6 for 103845993	vvi-u.5 for 100251916	vvi-u.5 for 100248238	vvi-u.5 for 100258691	ppo-u.5 for 7465506	ppo-u.5 for 7489481	mtr-u.5 for 25493603	mtr-u.5 for 25479454	mtr-u.5 for 25488377	ghi-r.1 for 107947350	ghi-r.1 for 107953640	ghi-r.1 for 107901350	bna-r.1 for 106360830	bna-r.1 for 106368878	bna-r.1 for 106375307	sot-r.1 for 102585522	sot-r.1 for 102584176	sot-r.1 for 102598088	cit-r.1 for 102630400	cit-r.1 for 102607243	cit-r.1 for 102615792	nta-r.1 for 107776389	nta-r.1 for 107773549	nta-r.1 for 107785276	cre-r.1 for CHLRE_12g503000v5

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Ortholog

Ortholog ID: 804

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

G3Pp1

G3Pp4

Function^*

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 5

Putative glycerol-3-phosphate transporter 1

Putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

Major facilitator superfamily protein

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 3

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 2

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 5

putative glycerol-3-phosphate transporter 4

putative glycerol-3-phosphate transporter 1

putative glycerol-3-phosphate transporter 4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	3
sbi00561	Glycerolipid metabolism	3
sbi00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	3
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00740	Riboflavin metabolism	2
zma04142	Lysosome	2
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	3
zma04382	Cornified envelope formation	2
zma00513	Various types of N-glycan biosynthesis	2
zma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	3
osa01232	Nucleotide metabolism	3
osa04144	Endocytosis	2
osa01240	Biosynthesis of cofactors	2
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2
ath00740	Riboflavin metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01250	Biosynthesis of nucleotide sugars	2
vvi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	3
ppo00565	Ether lipid metabolism	2
ppo00740	Riboflavin metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	2
ppo00561	Glycerolipid metabolism	2
ppo00740	Riboflavin metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	2
ghi00566	Sulfoquinovose metabolism	2
ghi00740	Riboflavin metabolism	2
ghi04142	Lysosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00740	Riboflavin metabolism	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	3
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	5
sot04016	MAPK signaling pathway - plant	4
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00750	Vitamin B6 metabolism	2
sot01240	Biosynthesis of cofactors	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2
cit00510	N-Glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	4
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00750	Vitamin B6 metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	4
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	3
cre03060	Protein export	2

Expression

Expression pattern

Entrez Gene ID^*

110434539

8083383

8065403

100216884

100191817

103629335

4344694

4340305

123147537

123157278

123168546

123410812

123411583

100840645

100825268

823896

827470

100804097

100806959

100785476

101249891

101248108

101245070

103833432

103845993

103855498

100251916

100248238

100258691

7465506

7489481

18094006

25493603

25479454

25488377

107947350

107933446

107939897

106374470

106428674

106438156

102585522

102584176

102598088

102630400

102607243

102615792

107785276

107804705

107813689

5716419

The preparation time of this page was 0.3 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	1	2	3	3	3	2	3	2	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8069618 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8069618 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**