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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8069714  pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 zma-u.5  103646617  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 vvi-u.5  100241844  putative pentatricopeptide repeat-containing protein At3g01580 

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Top 50 coexpressed genes to 8069714 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8069714 (sbi-r.1 coexpression data)

CoexMap"8069714"


sbiLOC8069714 | Entrez gene ID : 8069714
Species sbi zma vvi sly osa bna ghi gma nta mtr cre bra cit ppo hvu bdi sot tae ath
Paralog 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002443455.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002443455.2)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_002443455.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8069714

.

zma-u.5
for
103646617

.

vvi-u.5
for
100241844

.


Ortholog ID: 29056
Species zma vvi sbi
Symbol LOC103646617 LOC100241844 LOC8069714
Function* pentatricopeptide repeat-containing protein DOT4, chloroplastic putative pentatricopeptide repeat-containing protein At3g01580 pentatricopeptide repeat-containing protein At4g35130, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 2
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103646617 100241844 8069714
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