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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8069872   phosphoenolpyruvate carboxylase 2-like 
 zma-u.5   103642664   phosphoenolpyruvate carboxylase 1-like 
 zma-u.5   100191460   phosphoenolpyruvate carboxylase3 
 zma-u.5   100384708   Phosphoenolpyruvate carboxylase 3 
 osa-u.5   4346699   phosphoenolpyruvate carboxylase 2 
 osa-u.5   4328859   phosphoenolpyruvate carboxylase 1 
 osa-u.5   4345387   phosphoenolpyruvate carboxylase 2 
 ath-u.5   PPC3   phosphoenolpyruvate carboxylase 3 
 ath-u.5   PPC1   phosphoenolpyruvate carboxylase 1 
 ath-u.5   PPC2   phosphoenolpyruvate carboxylase 2 
 gma-u.5   100807407   phosphoenolpyruvate carboxylase 2 
 gma-u.5   100820574   phosphoenolpyruvate carboxylase, housekeeping isozyme-like 
 gma-u.5   PPC1   phosphoenolpyruvate carboxylase 
 sly-u.5   PEPC4   phosphoenolpyruvate carboxylase 
 sly-u.5   ppc2   phosphoenolpyruvate carboxylase 2 
 sly-u.5   PEPC2   phosphoenolpyruvate carboxylase 
 vvi-u.5   100267525   phosphoenolpyruvate carboxylase, housekeeping isozyme 
 vvi-u.5   100233103   phosphoenolpyruvate carboxylase, housekeeping isozyme 
 ppo-u.5   7458241   phosphoenolpyruvate carboxylase 2 
 ppo-u.5   18095497   phosphoenolpyruvate carboxylase, housekeeping isozyme 
 ppo-u.5   7472353   phosphoenolpyruvate carboxylase 
 mtr-u.5   11413239   phosphoenolpyruvate carboxylase 2 
 mtr-u.5   11407264   phosphoenolpyruvate carboxylase 
 mtr-u.5   11409065   phosphoenolpyruvate carboxylase 

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Top 50 coexpressed genes to 8069872 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8069872 (sbi-r.1 coexpression data)

CoexMap"8069872"


sbiLOC8069872 | Entrez gene ID : 8069872      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00620 [list] [network] Pyruvate metabolism (106 genes)
sbi00710 [list] [network] Carbon fixation by Calvin cycle (77 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
GO BP
GO:0015977 [list] [network] carbon fixation  (6 genes)  IEA  
GO:0048366 [list] [network] leaf development  (18 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (46 genes)  IEA  
GO CC
GO:0048046 [list] [network] apoplast  (69 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0008964 [list] [network] phosphoenolpyruvate carboxylase activity  (6 genes)  IEA  
Protein XP_002444204.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_002444204.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for XP_002444204.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8069872

.
zma-u.5
for
103642664

.
zma-u.5
for
100191460

.
zma-u.5
for
100384708

.
osa-u.5
for
4346699

.
osa-u.5
for
4328859

.
osa-u.5
for
4345387

.
ath-u.5
for
PPC3

.
ath-u.5
for
PPC1

.
ath-u.5
for
PPC2

.
gma-u.5
for
100807407

.
gma-u.5
for
100820574

.
gma-u.5
for
PPC1

.
sly-u.5
for
PEPC4

.
sly-u.5
for
ppc2

.
sly-u.5
for
PEPC2

.
vvi-u.5
for
100267525

.
vvi-u.5
for
100233103

.
ppo-u.5
for
7458241

.
ppo-u.5
for
18095497

.
ppo-u.5
for
7472353

.
mtr-u.5
for
11413239

.
mtr-u.5
for
11407264

.
mtr-u.5
for
11409065

.


Ortholog ID: 840
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit bdi bdi nta nta
Symbol PPC1 PPC2 LOC100820574 PEPC7 ppc2 ppc1 LOC4345387 LOC4346699 LOC542479 LOC103642664 LOC103869972 LOC103866650 LOC100267525 LOC100233103 LOC18095497 LOC7458241 LOC25502534 LOC11407264 LOC123103489 LOC123156484 LOC123399942 LOC123409239 LOC107895337 LOC107915834 LOC125575183 LOC106397771 CHLRE_11g476325v5 CHLRE_16g673852v5 LOC8058886 LOC8079221 LOC102603323 LOC102605963 LOC102608170 LOC100845336 LOC100829108 LOC107825450 LOC107762239
Function* phosphoenolpyruvate carboxylase 1 phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase, housekeeping isozyme-like phosphoenolpyruvate carboxylase phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 7 phosphoenolpyruvate carboxylase 1-like phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 1 phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 1-like phosphoenolpyruvate carboxylase phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase 3-like phosphoenolpyruvate carboxylase 3-like uncharacterized protein uncharacterized protein phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase-like phosphoenolpyruvate carboxylase-like phosphoenolpyruvate carboxylase, housekeeping isozyme phosphoenolpyruvate carboxylase 2 phosphoenolpyruvate carboxylase 1 phosphoenolpyruvate carboxylase phosphoenolpyruvate carboxylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00190 Oxidative phosphorylation 5
ath00020 Citrate cycle (TCA cycle) 3
ath00010 Glycolysis / Gluconeogenesis 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath01230 Biosynthesis of amino acids 5
ath00010 Glycolysis / Gluconeogenesis 3
ath00710 Carbon fixation by Calvin cycle 3
ath00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 7
gma01200 Carbon metabolism 7
gma00710 Carbon fixation by Calvin cycle 6
gma00190 Oxidative phosphorylation 6
gma04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00190 Oxidative phosphorylation 5
sly04145 Phagosome 5
sly00620 Pyruvate metabolism 4
sly00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa00020 Citrate cycle (TCA cycle) 6
osa01210 2-Oxocarboxylic acid metabolism 6
osa01230 Biosynthesis of amino acids 5
osa00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa03040 Spliceosome 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 10
zma00020 Citrate cycle (TCA cycle) 7
zma01210 2-Oxocarboxylic acid metabolism 5
zma01230 Biosynthesis of amino acids 5
zma00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 7
zma01200 Carbon metabolism 7
zma00620 Pyruvate metabolism 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 3
bra01310 Nitrogen cycle 3
bra01200 Carbon metabolism 3
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 5
vvi00710 Carbon fixation by Calvin cycle 3
vvi00620 Pyruvate metabolism 2
vvi01240 Biosynthesis of cofactors 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo01230 Biosynthesis of amino acids 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 8
mtr00710 Carbon fixation by Calvin cycle 7
mtr00620 Pyruvate metabolism 4
mtr00010 Glycolysis / Gluconeogenesis 4
mtr01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00710 Carbon fixation by Calvin cycle 4
mtr00010 Glycolysis / Gluconeogenesis 4
mtr01230 Biosynthesis of amino acids 4
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 11
tae00710 Carbon fixation by Calvin cycle 4
tae00010 Glycolysis / Gluconeogenesis 4
tae01230 Biosynthesis of amino acids 4
tae00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00910 Nitrogen metabolism 3
tae01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03060 Protein export 2
hvu00620 Pyruvate metabolism 2
hvu01200 Carbon metabolism 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 4
hvu00910 Nitrogen metabolism 3
hvu00620 Pyruvate metabolism 3
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 7
bna00710 Carbon fixation by Calvin cycle 7
bna01200 Carbon metabolism 7
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 7
bna00710 Carbon fixation by Calvin cycle 7
bna01200 Carbon metabolism 7
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 5
cre00250 Alanine, aspartate and glutamate metabolism 4
cre01230 Biosynthesis of amino acids 4
cre00230 Purine metabolism 4
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 5
cre00250 Alanine, aspartate and glutamate metabolism 4
cre01230 Biosynthesis of amino acids 4
cre00230 Purine metabolism 4
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 3
sbi00566 Sulfoquinovose metabolism 3
sbi00740 Riboflavin metabolism 2
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00500 Starch and sucrose metabolism 6
sot00620 Pyruvate metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 10
sot00020 Citrate cycle (TCA cycle) 5
sot01210 2-Oxocarboxylic acid metabolism 5
sot00620 Pyruvate metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00270 Cysteine and methionine metabolism 3
bdi00450 Selenocompound metabolism 3
bdi00190 Oxidative phosphorylation 2
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
bdi04144 Endocytosis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi01200 Carbon metabolism 2
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 8
nta01310 Nitrogen cycle 6
nta01240 Biosynthesis of cofactors 4
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 6
nta00710 Carbon fixation by Calvin cycle 6
nta01200 Carbon metabolism 6
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841765 818860 100820574 547456 101267723 101260311 4345387 4346699 542479 103642664 103869972 103866650 100267525 100233103 18095497 7458241 25502534 11407264 123103489 123156484 123399942 123409239 107895337 107915834 125575183 106397771 5721430 66056659 8058886 8079221 102603323 102605963 102608170 100845336 100829108 107825450 107762239
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