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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072220   E3 ubiquitin-protein ligase SP1 
 zma-u.5   100193166   uncharacterized LOC100193166 
 zma-u.5   103647901   E3 ubiquitin-protein ligase SP1 
 osa-u.5   4344112   E3 ubiquitin-protein ligase SP1 
 ath-u.5   ZCF61   E3 Ubiquitin ligase family protein 
 ath-u.5   DAL1   E3 Ubiquitin ligase family protein 
 gma-u.5   100800734   E3 ubiquitin-protein ligase SP1 
 gma-u.5   100803252   E3 ubiquitin-protein ligase SP1 
 sly-u.5   101250130   E3 ubiquitin-protein ligase SP1 
 vvi-u.5   100247743   E3 ubiquitin-protein ligase SP1 
 ppo-u.5   7457989   E3 ubiquitin-protein ligase SP1 
 mtr-u.5   11417118   E3 ubiquitin-protein ligase SP1 
 mtr-u.5   11412285   E3 ubiquitin-protein ligase SP1 

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Top 50 coexpressed genes to 8072220 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072220 (sbi-r.1 coexpression data)

CoexMap"8072220"


sbiLOC8072220 | Entrez gene ID : 8072220      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (854 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
Protein XP_002463293.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  chlo_mito 2,  nucl 1,  cyto 1,  cyto_nucl 1,  cysk_plas 1  (predict for XP_002463293.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_002463293.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072220

.
zma-u.5
for
100193166

.
zma-u.5
for
103647901

.
osa-u.5
for
4344112

.
ath-u.5
for
ZCF61

.
ath-u.5
for
DAL1

.
gma-u.5
for
100800734

.
gma-u.5
for
100803252

.
sly-u.5
for
101250130

.
vvi-u.5
for
100247743

.
ppo-u.5
for
7457989

.
mtr-u.5
for
11417118

.
mtr-u.5
for
11412285

.


Ortholog ID: 4473
Species ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit cit bdi nta nta
Symbol ZCF61 LOC100803252 LOC100800734 LOC101250130 LOC4344112 LOC100193166 LOC103647901 LOC103838246 LOC103842109 LOC100247743 LOC7457989 LOC11417118 LOC123187712 LOC123051813 LOC123425000 LOC107924813 LOC107949932 LOC106375237 CHLRE_03g169050v5 LOC8072220 LOC102601282 LOC102629766 LOC102630052 LOC100835811 LOC107795503 LOC107769306
Function* E3 Ubiquitin ligase family protein E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 uncharacterized LOC100193166 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SPL1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SPL1 uncharacterized protein E3 ubiquitin-protein ligase SP1 mitochondrial ubiquitin ligase activator of NFKB 1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1 E3 ubiquitin-protein ligase SP1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 3
sly00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842247 100803252 100800734 101250130 4344112 100193166 103647901 103838246 103842109 100247743 7457989 11417118 123187712 123051813 123425000 107924813 107949932 106375237 5728972 8072220 102601282 102629766 102630052 100835811 107795503 107769306
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