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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8072907   pentatricopeptide repeat-containing protein At2g13600 
 osa-u.5   107280628   pentatricopeptide repeat-containing protein At2g13600-like 
 gma-u.5   100794132   pentatricopeptide repeat-containing protein At2g13600 
 sly-u.5   101255766   pentatricopeptide repeat-containing protein At2g13600-like 
 mtr-u.5   11443453   pentatricopeptide repeat-containing protein At4g16470 

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Top 50 coexpressed genes to 8072907 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8072907 (sbi-r.1 coexpression data)

CoexMap"8072907"


sbiLOC8072907 | Entrez gene ID : 8072907    
Species sbi osa gma sly mtr bra nta cre vvi cit hvu ppo bdi sot zma tae ath bna ghi
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002436971.2 [sequence] [blastp]
XP_021304317.1 [sequence] [blastp]
XP_021304318.1 [sequence] [blastp]
XP_021304319.1 [sequence] [blastp]
XP_021304320.1 [sequence] [blastp]
XP_021304321.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_002436971.2)
chlo 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_021304317.1)
chlo 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_021304318.1)
chlo 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_021304319.1)
chlo 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_021304320.1)
chlo 6,  mito 1,  plas 1,  mito_plas 1  (predict for XP_021304321.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for XP_002436971.2)
mito 8,  chlo 3  (predict for XP_021304317.1)
mito 8,  chlo 3  (predict for XP_021304318.1)
mito 8,  chlo 3  (predict for XP_021304319.1)
mito 8,  chlo 3  (predict for XP_021304320.1)
mito 8,  chlo 3  (predict for XP_021304321.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8072907

.
osa-u.5
for
107280628

.
gma-u.5
for
100794132

.
sly-u.5
for
101255766

.
mtr-u.5
for
11443453

.


Ortholog ID: 13525
Species gma sly osa mtr hvu ghi sbi sot cit bdi nta nta
Symbol LOC100794132 LOC101255766 LOC107280628 LOC11443453 LOC123430183 LOC107952778 LOC8072907 LOC102586288 LOC102608970 LOC100830488 LOC107778896 LOC107829845
Function* pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At2g13600-like putative pentatricopeptide repeat-containing protein At3g25970 pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100794132 101255766 107280628 11443453 123430183 107952778 8072907 102586288 102608970 100830488 107778896 107829845
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