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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073097   proteasome subunit alpha type-3 
 zma-u.5   100283656   uncharacterized LOC100283656 
 zma-u.5   100283094   proteasome subunit alpha type 3 
 zma-u.5   100285986   proteasome subunit alpha type 3 
 osa-u.5   4339169   proteasome subunit alpha type-3-like 
 osa-u.5   4327357   proteasome subunit alpha type-3-like 
 ath-u.5   PAG1   20S proteasome alpha subunit G1 
 gma-u.5   100527499   putative proteasome subunit alpha type-3 
 gma-u.5   100820387   proteasome subunit alpha type-3-like 
 sly-u.5   101253544   proteasome subunit alpha type-3 
 sly-u.5   101256141   proteasome subunit alpha type-3 
 vvi-u.5   100251722   proteasome subunit alpha type-3 
 ppo-u.5   7488180   proteasome subunit alpha type-3 
 ppo-u.5   7472985   proteasome subunit alpha type-3 
 mtr-u.5   25495758   proteasome subunit alpha type-3 

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Top 50 coexpressed genes to 8073097 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073097 (sbi-r.1 coexpression data)

CoexMap"8073097"


sbiLOC8073097 | Entrez gene ID : 8073097      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03050 [list] [network] Proteasome (59 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO CC
GO:0019773 [list] [network] proteasome core complex, alpha-subunit complex  (12 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (23 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
Protein XP_002461114.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for XP_002461114.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002461114.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073097

.
zma-u.5
for
100283656

.
zma-u.5
for
100283094

.
zma-u.5
for
100285986

.
osa-u.5
for
4339169

.
osa-u.5
for
4327357

.
ath-u.5
for
PAG1

.
gma-u.5
for
100527499

.
gma-u.5
for
100820387

.
sly-u.5
for
101253544

.
sly-u.5
for
101256141

.
vvi-u.5
for
100251722

.
ppo-u.5
for
7488180

.
ppo-u.5
for
7472985

.
mtr-u.5
for
25495758

.


Ortholog ID: 4197
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol PAG1 LOC100527499 LOC100820387 LOC101253544 LOC101256141 LOC4327357 LOC4339169 LOC100283656 LOC100285986 LOC103829643 LOC103864745 LOC100251722 LOC7472985 LOC7488180 LOC25495758 LOC123104315 LOC123182430 LOC123399784 LOC123444163 LOC107891461 LOC107891482 LOC106448672 LOC106445441 CHLRE_14g619550v5 LOC8073097 LOC8055273 LOC102600015 LOC102581342 LOC102612378 LOC100838471 LOC107809579 LOC107781489
Function* 20S proteasome alpha subunit G1 putative proteasome subunit alpha type-3 proteasome subunit alpha type-3-like proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3-like proteasome subunit alpha type-3-like uncharacterized LOC100283656 proteasome subunit alpha type 3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3-like proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 uncharacterized protein proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3-like proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3 proteasome subunit alpha type-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 10
gma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 10
bra03040 Spliceosome 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 7
ppo04144 Endocytosis 2
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 15
hvu00020 Citrate cycle (TCA cycle) 2
hvu00190 Oxidative phosphorylation 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 9
ghi00190 Oxidative phosphorylation 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 11
ghi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 9
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 13
bna03040 Spliceosome 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 11
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 16
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 18
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 17
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817244 100527499 100820387 101253544 101256141 4327357 4339169 100283656 100285986 103829643 103864745 100251722 7472985 7488180 25495758 123104315 123182430 123399784 123444163 107891461 107891482 106448672 106445441 5715877 8073097 8055273 102600015 102581342 102612378 100838471 107809579 107781489
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