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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073145   pentatricopeptide repeat-containing protein At1g01970 
 zma-u.5   100191293   Pentatricopeptide repeat-containing protein 
 osa-u.5   4344187   pentatricopeptide repeat-containing protein At1g01970 
 ath-u.5   AT1G01970   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802331   pentatricopeptide repeat-containing protein At1g01970 
 gma-u.5   100778274   pentatricopeptide repeat-containing protein At1g01970 
 sly-u.5   101254637   pentatricopeptide repeat-containing protein At1g01970 
 vvi-u.5   100243847   pentatricopeptide repeat-containing protein At1g01970 
 ppo-u.5   7488903   pentatricopeptide repeat-containing protein At1g01970 
 mtr-u.5   11436433   pentatricopeptide repeat-containing protein At1g01970 

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Top 50 coexpressed genes to 8073145 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073145 (sbi-r.1 coexpression data)

CoexMap"8073145"


sbiLOC8073145 | Entrez gene ID : 8073145    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002463341.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 3  (predict for XP_002463341.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002463341.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073145

.
zma-u.5
for
100191293

.
osa-u.5
for
4344187

.
ath-u.5
for
AT1G01970

.
gma-u.5
for
100802331

.
gma-u.5
for
100778274

.
sly-u.5
for
101254637

.
vvi-u.5
for
100243847

.
ppo-u.5
for
7488903

.
mtr-u.5
for
11436433

.


Ortholog ID: 11779
Species ath gma gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G01970 LOC100802331 LOC100778274 LOC101254637 LOC4344187 LOC100191293 LOC103844689 LOC100243847 LOC7488903 LOC11436433 LOC123043836 LOC123424852 LOC107899904 LOC107900861 LOC106370832 LOC111207781 LOC8073145 LOC102581801 LOC102629730 LOC100822198 LOC107831330 LOC107808670
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970-like pentatricopeptide repeat-containing protein At1g01970-like pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 pentatricopeptide repeat-containing protein At1g01970 uncharacterized LOC107831330 uncharacterized LOC107808670
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi01240 Biosynthesis of cofactors 3
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839299 100802331 100778274 101254637 4344187 100191293 103844689 100243847 7488903 11436433 123043836 123424852 107899904 107900861 106370832 111207781 8073145 102581801 102629730 100822198 107831330 107808670
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