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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073881   pentatricopeptide repeat-containing protein At1g31920 
 zma-u.5   103653945   pentatricopeptide repeat-containing protein At1g31920 
 zma-u.5   103627584   pentatricopeptide repeat-containing protein At1g31920 
 osa-u.5   4330408   pentatricopeptide repeat-containing protein At1g31920 
 gma-u.5   100795944   pentatricopeptide repeat-containing protein At1g31920 
 gma-u.5   100804442   pentatricopeptide repeat-containing protein At1g31920 
 gma-u.5   100816034   pentatricopeptide repeat-containing protein At1g31920 
 sly-u.5   101257993   pentatricopeptide repeat-containing protein At1g31920 
 vvi-u.5   100247257   pentatricopeptide repeat-containing protein At1g31920 
 ppo-u.5   18094108   pentatricopeptide repeat-containing protein At1g31920 
 mtr-u.5   11412176   pentatricopeptide repeat-containing protein At1g31920 

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Top 50 coexpressed genes to 8073881 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073881 (sbi-r.1 coexpression data)

CoexMap"8073881"


sbiLOC8073881 | Entrez gene ID : 8073881      
Species sbi zma osa gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae ath bna ghi
Paralog 1 2 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002452703.1 [sequence] [blastp]
XP_021314503.1 [sequence] [blastp]
XP_021314504.1 [sequence] [blastp]
XP_021314505.1 [sequence] [blastp]
XP_021314506.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_002452703.1)
chlo 4,  mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_021314503.1)
chlo 4,  mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_021314504.1)
chlo 4,  mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_021314505.1)
chlo 4,  mito 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_021314506.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_002452703.1)
mito 6,  chlo 3  (predict for XP_021314503.1)
mito 6,  chlo 3  (predict for XP_021314504.1)
mito 6,  chlo 3  (predict for XP_021314505.1)
mito 6,  chlo 3  (predict for XP_021314506.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073881

.
zma-u.5
for
103653945

.
zma-u.5
for
103627584

.
osa-u.5
for
4330408

.
gma-u.5
for
100795944

.
gma-u.5
for
100804442

.
gma-u.5
for
100816034

.
sly-u.5
for
101257993

.
vvi-u.5
for
100247257

.
ppo-u.5
for
18094108

.
mtr-u.5
for
11412176

.


Ortholog ID: 8727
Species gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LOC100795944 LOC100804442 LOC101257993 LOC4330408 LOC103653945 LOC103627584 LOC103868919 LOC100247257 LOC18094108 LOC11412176 LOC123128075 LOC123137864 LOC123401682 LOC107930645 LOC107919994 LOC106451735 LOC106451736 LOC8073881 LOC102593490 LOC102621081 LOC100836771 LOC107823983 LOC107825838
Function* pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920-like pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920 pentatricopeptide repeat-containing protein At1g31920-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 7
gma00195 Photosynthesis 2
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 4
gma01200 Carbon metabolism 4
gma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 7
sly01240 Biosynthesis of cofactors 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 4
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 6
ghi00195 Photosynthesis 4
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 6
ghi00195 Photosynthesis 4
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 7
sbi00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 7
sot00860 Porphyrin metabolism 6
sot00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100795944 100804442 101257993 4330408 103653945 103627584 103868919 100247257 18094108 11412176 123128075 123137864 123401682 107930645 107919994 106451735 106451736 8073881 102593490 102621081 100836771 107823983 107825838
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