Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074058   pre-mRNA-splicing factor SLU7 
 zma-u.5   103629005   pre-mRNA-splicing factor SLU7 
 zma-u.5   100502246   uncharacterized LOC100502246 
 osa-u.5   4344572   pre-mRNA-splicing factor SLU7-like 
 ath-u.5   SMP2   Pre-mRNA splicing Prp18-interacting factor 
 ath-u.5   SMP1   Pre-mRNA splicing Prp18-interacting factor 
 gma-u.5   100797503   pre-mRNA-splicing factor SLU7-A 
 gma-u.5   100778457   pre-mRNA-splicing factor SLU7-A 
 sly-u.5   101260949   pre-mRNA-splicing factor SLU7 
 sly-u.5   101252328   pre-mRNA-splicing factor SLU7 
 vvi-u.5   100249416   pre-mRNA-splicing factor SLU7 
 ppo-u.5   7453862   pre-mRNA-splicing factor SLU7-A 
 ppo-u.5   7484720   pre-mRNA-splicing factor SLU7-A 
 mtr-u.5   25499261   pre-mRNA-splicing factor SLU7-A 

close


Top 50 coexpressed genes to 8074058 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8074058 (sbi-r.1 coexpression data)

CoexMap"8074058"


sbiLOC8074058 | Entrez gene ID : 8074058      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 2 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (145 genes)  IEA  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (9 genes)  IEA  
Protein XP_002443802.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_002443802.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002443802.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074058

.
zma-u.5
for
103629005

.
zma-u.5
for
100502246

.
osa-u.5
for
4344572

.
ath-u.5
for
SMP2

.
ath-u.5
for
SMP1

.
gma-u.5
for
100797503

.
gma-u.5
for
100778457

.
sly-u.5
for
101260949

.
sly-u.5
for
101252328

.
vvi-u.5
for
100249416

.
ppo-u.5
for
7453862

.
ppo-u.5
for
7484720

.
mtr-u.5
for
25499261

.


Ortholog ID: 5817
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol SMP1 SMP2 LOC100797503 LOC100778457 LOC101260949 LOC101252328 LOC4344572 LOC103629005 LOC100502246 LOC103833762 LOC103836599 LOC100249416 LOC7484720 LOC7453862 LOC25499261 LOC123169807 LOC123159366 LOC123407575 LOC107914928 LOC121214909 LOC111208800 LOC106401134 CHLRE_03g194000v5 LOC8074058 LOC102599170 LOC102586065 LOC102616591 LOC100821942 LOC107767977 LOC107824087
Function* Pre-mRNA splicing Prp18-interacting factor Pre-mRNA splicing Prp18-interacting factor pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7-like pre-mRNA-splicing factor SLU7 uncharacterized LOC100502246 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7-A uncharacterized protein pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7-like pre-mRNA-splicing factor SLU7-like pre-mRNA-splicing factor SLU7-A pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7 pre-mRNA-splicing factor SLU7-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
zma03040 Spliceosome 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 8
bra03040 Spliceosome 6
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03082 ATP-dependent chromatin remodeling 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03250 Viral life cycle - HIV-1 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03015 mRNA surveillance pathway 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03022 Basal transcription factors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842877 829866 100797503 100778457 101260949 101252328 4344572 103629005 100502246 103833762 103836599 100249416 7484720 7453862 25499261 123169807 123159366 123407575 107914928 121214909 111208800 106401134 5718713 8074058 102599170 102586065 102616591 100821942 107767977 107824087
The preparation time of this page was 0.1 [sec].