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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074299   cytoplasmic tRNA 2-thiolation protein 2 
 zma-u.5   100279201   Cytoplasmic tRNA 2-thiolation protein 2 
 osa-u.5   4352669   cytoplasmic tRNA 2-thiolation protein 2-like 
 ath-u.5   AT4G35910   Adenine nucleotide alpha hydrolases-like superfamily protein 
 gma-u.5   100804325   cytoplasmic tRNA 2-thiolation protein 2 
 sly-u.5   101255447   cytoplasmic tRNA 2-thiolation protein 2 
 vvi-u.5   100252179   cytoplasmic tRNA 2-thiolation protein 2 
 ppo-u.5   7473621   cytoplasmic tRNA 2-thiolation protein 2 
 mtr-u.5   25499016   cytoplasmic tRNA 2-thiolation protein 2 

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Top 50 coexpressed genes to 8074299 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8074299 (sbi-r.1 coexpression data)

CoexMap"8074299"


sbiLOC8074299 | Entrez gene ID : 8074299      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04122 [list] [network] Sulfur relay system (13 genes)
GO BP
GO:0002143 [list] [network] tRNA wobble position uridine thiolation  (4 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0016783 [list] [network] sulfurtransferase activity  (14 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (27 genes)  IEA  
Protein XP_002443457.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_002443457.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_002443457.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074299

.
zma-u.5
for
100279201

.
osa-u.5
for
4352669

.
ath-u.5
for
AT4G35910

.
gma-u.5
for
100804325

.
sly-u.5
for
101255447

.
vvi-u.5
for
100252179

.
ppo-u.5
for
7473621

.
mtr-u.5
for
25499016

.


Ortholog ID: 10901
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G35910 LOC100804325 LOC101255447 LOC4352669 LOC100279201 LOC103865246 LOC100252179 LOC7473621 LOC25499016 LOC123110563 LOC123102386 LOC123396041 LOC107912772 LOC107912900 LOC106431592 LOC125580519 CHLRE_01g043500v5 LOC8074299 LOC102586394 LOC102615560 LOC100821158 LOC107829529 LOC107813504
Function* Adenine nucleotide alpha hydrolases-like superfamily protein cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2-like Cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2-like uncharacterized protein cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2 cytoplasmic tRNA 2-thiolation protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04122 Sulfur relay system 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00230 Purine metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03013 Nucleocytoplasmic transport 2
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04122 Sulfur relay system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829746 100804325 101255447 4352669 100279201 103865246 100252179 7473621 25499016 123110563 123102386 123396041 107912772 107912900 106431592 125580519 5715617 8074299 102586394 102615560 100821158 107829529 107813504
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