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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8074693   pentatricopeptide repeat-containing protein At4g20770 
 zma-u.5   100191397   Pentatricopeptide repeat-containing protein 
 osa-u.5   4328419   pentatricopeptide repeat-containing protein At4g20770 
 gma-u.5   100792265   pentatricopeptide repeat-containing protein At4g20770 
 sly-u.5   101245771   pentatricopeptide repeat-containing protein 
 vvi-u.5   100259353   pentatricopeptide repeat-containing protein At4g20770 
 mtr-u.5   11433731   pentatricopeptide repeat-containing protein At4g20770 

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Top 50 coexpressed genes to 8074693 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8074693 (sbi-r.1 coexpression data)

CoexMap"8074693"


sbiLOC8074693 | Entrez gene ID : 8074693    
Species sbi zma osa gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae ath bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002453356.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002453356.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002453356.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8074693

.
zma-u.5
for
100191397

.
osa-u.5
for
4328419

.
gma-u.5
for
100792265

.
sly-u.5
for
101245771

.
vvi-u.5
for
100259353

.
mtr-u.5
for
11433731

.


Ortholog ID: 11711
Species gma sly osa zma bra vvi mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol LOC100792265 LOC101245771 LOC4328419 LOC100191397 LOC103858324 LOC100259353 LOC11433731 LOC123132417 LOC123143991 LOC123404430 LOC107961888 LOC107892312 LOC8074693 LOC102582314 LOC102626652 LOC100831549 LOC107773703 LOC107784977
Function* pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g20770 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770 pentatricopeptide repeat-containing protein At4g20770-like pentatricopeptide repeat-containing protein At4g20770-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03430 Mismatch repair 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100792265 101245771 4328419 100191397 103858324 100259353 11433731 123132417 123143991 123404430 107961888 107892312 8074693 102582314 102626652 100831549 107773703 107784977
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