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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075169   thylakoid lumenal protein TL20.3, chloroplastic 
 zma-u.5   100194053   Thylakoid lumenal protein TL20.3 chloroplastic 
 osa-u.5   4330131   thylakoid lumenal protein TL20.3, chloroplastic 
 ath-u.5   AT1G12250   Pentapeptide repeat-containing protein 
 gma-u.5   100805220   thylakoid lumenal protein TL20.3, chloroplastic 
 sly-u.5   101246554   thylakoid lumenal protein TL20.3, chloroplastic 
 vvi-u.5   100250522   thylakoid lumenal protein TL20.3, chloroplastic 
 vvi-u.5   104882043   thylakoid lumenal protein TL20.3, chloroplastic 
 ppo-u.5   7479217   thylakoid lumenal protein TL20.3, chloroplastic 
 mtr-u.5   11443119   thylakoid lumenal protein TL20.3, chloroplastic 

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Top 50 coexpressed genes to 8075169 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075169 (sbi-r.1 coexpression data)

CoexMap"8075169"


sbiLOC8075169 | Entrez gene ID : 8075169      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002454568.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for XP_002454568.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002454568.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075169

.
zma-u.5
for
100194053

.
osa-u.5
for
4330131

.
ath-u.5
for
AT1G12250

.
gma-u.5
for
100805220

.
sly-u.5
for
101246554

.
vvi-u.5
for
100250522

.
vvi-u.5
for
104882043

.
ppo-u.5
for
7479217

.
mtr-u.5
for
11443119

.


Ortholog ID: 9771
Species ath gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G12250 LOC100805220 LOC101246554 LOC4330131 LOC100194053 LOC103843144 LOC104882043 LOC100250522 LOC7479217 LOC11443119 LOC123127850 LOC123144947 LOC123402257 LOC107931696 LOC107931266 LOC106414971 LOC106415018 CHLRE_17g721700v5 LOC8075169 LOC102582546 LOC102622859 LOC100832459 LOC107811929 LOC107802008
Function* Pentapeptide repeat-containing protein thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic Thylakoid lumenal protein TL20.3 chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic-like thylakoid lumenal protein TL20.3, chloroplastic uncharacterized protein thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic thylakoid lumenal protein TL20.3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma00051 Fructose and mannose metabolism 2
gma00562 Inositol phosphate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00430 Taurine and hypotaurine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00670 One carbon pool by folate 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae00670 One carbon pool by folate 2
tae00785 Lipoic acid metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837778 100805220 101246554 4330131 100194053 103843144 104882043 100250522 7479217 11443119 123127850 123144947 123402257 107931696 107931266 106414971 106415018 5722700 8075169 102582546 102622859 100832459 107811929 107802008
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