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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075461   putative pentatricopeptide repeat-containing protein At1g64310 
 zma-u.5   100284554   selenium-binding protein-like 
 osa-u.5   4326879   putative pentatricopeptide repeat-containing protein At1g64310 
 gma-u.5   100807542   putative pentatricopeptide repeat-containing protein At1g64310 
 gma-u.5   100820049   putative pentatricopeptide repeat-containing protein At1g64310 
 sly-u.5   101256579   pentatricopeptide repeat-containing protein 
 mtr-u.5   11438919   putative pentatricopeptide repeat-containing protein At1g64310 

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Top 50 coexpressed genes to 8075461 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075461 (sbi-r.1 coexpression data)

CoexMap"8075461"


sbiLOC8075461 | Entrez gene ID : 8075461    
Species sbi zma osa gma sly mtr bra nta cre vvi cit hvu ppo bdi sot tae ath bna ghi
Paralog 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002455765.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 2,  nucl 1,  mito 1  (predict for XP_002455765.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002455765.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075461

.
zma-u.5
for
100284554

.
osa-u.5
for
4326879

.
gma-u.5
for
100807542

.
gma-u.5
for
100820049

.
sly-u.5
for
101256579

.
mtr-u.5
for
11438919

.


Ortholog ID: 11511
Species gma gma sly osa zma bra mtr tae tae hvu bna sbi sot cit nta nta
Symbol LOC100820049 LOC100807542 LOC101256579 LOC4326879 LOC100284554 LOC103838151 LOC11438919 LOC123062659 LOC123079816 LOC123444847 LOC106392087 LOC8075461 LOC102604937 LOC102615029 LOC107771702 LOC107803295
Function* putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At1g64310 selenium-binding protein-like putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310 putative pentatricopeptide repeat-containing protein At1g64310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100820049 100807542 101256579 4326879 100284554 103838151 11438919 123062659 123079816 123444847 106392087 8075461 102604937 102615029 107771702 107803295
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