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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8075909   isocitrate dehydrogenase [NADP] 
 zma-u.5   100272371   uncharacterized LOC100272371 
 zma-u.5   100274592   uncharacterized LOC100274592 
 zma-u.5   100217128   seed maturation protein PM41 
 osa-u.5   4336353   isocitrate dehydrogenase [NADP] 
 osa-u.5   4327213   cytosolic isocitrate dehydrogenase [NADP] 
 osa-u.5   4339674   isocitrate dehydrogenase [NADP] 
 ath-u.5   AT5G14590   Isocitrate/isopropylmalate dehydrogenase family protein 
 ath-u.5   ICDH   isocitrate dehydrogenase 
 ath-u.5   cICDH   cytosolic NADP+-dependent isocitrate dehydrogenase 
 gma-u.5   IDH1   NADP-dependent isocitrate dehydrogenase 
 gma-u.5   100786103   isocitrate dehydrogenase [NADP], chloroplastic 
 gma-u.5   100816688   isocitrate dehydrogenase [NADP], chloroplastic 
 sly-u.5   101248445   isocitrate dehydrogenase [NADP] 
 sly-u.5   101255848   isocitrate dehydrogenase [NADP] 
 sly-u.5   101268602   isocitrate dehydrogenase [NADP] 
 vvi-u.5   100261578   isocitrate dehydrogenase [NADP] 
 vvi-u.5   100249290   isocitrate dehydrogenase [NADP] 
 vvi-u.5   100243260   isocitrate dehydrogenase [NADP] 
 ppo-u.5   7464575   isocitrate dehydrogenase [NADP] 
 ppo-u.5   112325627   isocitrate dehydrogenase [NADP] 
 ppo-u.5   7462131   isocitrate dehydrogenase [NADP] 
 mtr-u.5   11419675   isocitrate dehydrogenase [NADP] 
 mtr-u.5   11445769   isocitrate dehydrogenase [NADP] 
 mtr-u.5   11425956   isocitrate dehydrogenase [NADP], chloroplastic 

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Top 50 coexpressed genes to 8075909 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075909 (sbi-r.1 coexpression data)

CoexMap"8075909"


sbiLOC8075909 | Entrez gene ID : 8075909      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00020 [list] [network] Citrate cycle (TCA cycle) (53 genes)
sbi00480 [list] [network] Glutathione metabolism (125 genes)
sbi01200 [list] [network] Carbon metabolism (264 genes)
sbi01210 [list] [network] 2-Oxocarboxylic acid metabolism (77 genes)
sbi01230 [list] [network] Biosynthesis of amino acids (224 genes)
sbi04146 [list] [network] Peroxisome (97 genes)
GO BP
GO:0006102 [list] [network] isocitrate metabolic process  (6 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (539 genes)  IEA  
GO MF
GO:0004450 [list] [network] isocitrate dehydrogenase (NADP+) activity  (3 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (79 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (114 genes)  IEA  
Protein XP_002446765.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_002446765.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for XP_002446765.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8075909

.
zma-u.5
for
100272371

.
zma-u.5
for
100274592

.
zma-u.5
for
100217128

.
osa-u.5
for
4336353

.
osa-u.5
for
4327213

.
osa-u.5
for
4339674

.
ath-u.5
for
AT5G14590

.
ath-u.5
for
ICDH

.
ath-u.5
for
cICDH

.
gma-u.5
for
IDH1

.
gma-u.5
for
100786103

.
gma-u.5
for
100816688

.
sly-u.5
for
101248445

.
sly-u.5
for
101255848

.
sly-u.5
for
101268602

.
vvi-u.5
for
100261578

.
vvi-u.5
for
100249290

.
vvi-u.5
for
100243260

.
ppo-u.5
for
7464575

.
ppo-u.5
for
112325627

.
ppo-u.5
for
7462131

.
mtr-u.5
for
11419675

.
mtr-u.5
for
11445769

.
mtr-u.5
for
11425956

.


Ortholog ID: 1324
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G14590 ICDH LOC100816688 IDH1 LOC101268602 LOC101255848 LOC4327213 LOC4324176 LOC100217128 LOC100274592 LOC103852304 LOC103831074 LOC100243260 LOC100249290 LOC7468338 LOC7487863 LOC11445769 LOC11419675 LOC123078694 LOC123053862 LOC123443997 LOC123427205 LOC107888667 LOC107920416 LOC106381331 LOC106353193 CHLRE_04g214500v5 LOC110433864 LOC110430300 LOC102591365 LOC102578331 LOC102618681 LOC102629733 LOC100837485 LOC100837775 LOC107801694 LOC107768947
Function* Isocitrate/isopropylmalate dehydrogenase family protein isocitrate dehydrogenase isocitrate dehydrogenase [NADP], chloroplastic NADP-dependent isocitrate dehydrogenase isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] seed maturation protein PM41 uncharacterized LOC100274592 cytosolic isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP]-like isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] peroxisomal isocitrate dehydrogenase [NADP] uncharacterized protein cytosolic isocitrate dehydrogenase [NADP]-like isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP]-like isocitrate dehydrogenase [NADP]-like isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial cytosolic isocitrate dehydrogenase [NADP] cytosolic isocitrate dehydrogenase [NADP] isocitrate dehydrogenase [NADP]-like isocitrate dehydrogenase [NADP]-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00020 Citrate cycle (TCA cycle) 4
ath00480 Glutathione metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00480 Glutathione metabolism 4
ath04146 Peroxisome 4
ath00020 Citrate cycle (TCA cycle) 3
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 6
gma01200 Carbon metabolism 6
gma01210 2-Oxocarboxylic acid metabolism 6
gma04146 Peroxisome 4
gma01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 10
gma00020 Citrate cycle (TCA cycle) 9
gma01210 2-Oxocarboxylic acid metabolism 9
gma01230 Biosynthesis of amino acids 5
gma00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00020 Citrate cycle (TCA cycle) 5
sly01230 Biosynthesis of amino acids 5
sly00620 Pyruvate metabolism 4
sly01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 6
sly00230 Purine metabolism 4
sly00270 Cysteine and methionine metabolism 4
sly01240 Biosynthesis of cofactors 3
sly00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 12
osa04145 Phagosome 9
osa04142 Lysosome 4
osa00020 Citrate cycle (TCA cycle) 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa00020 Citrate cycle (TCA cycle) 5
osa01210 2-Oxocarboxylic acid metabolism 4
osa01230 Biosynthesis of amino acids 4
osa04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 6
zma00230 Purine metabolism 4
zma00730 Thiamine metabolism 4
zma01232 Nucleotide metabolism 4
zma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00071 Fatty acid degradation 5
zma00592 alpha-Linolenic acid metabolism 5
zma01212 Fatty acid metabolism 5
zma01200 Carbon metabolism 4
zma00410 beta-Alanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra01230 Biosynthesis of amino acids 3
bra04016 MAPK signaling pathway - plant 2
bra04070 Phosphatidylinositol signaling system 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra01230 Biosynthesis of amino acids 8
bra00190 Oxidative phosphorylation 7
bra04145 Phagosome 7
bra00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 10
vvi00010 Glycolysis / Gluconeogenesis 7
vvi01230 Biosynthesis of amino acids 7
vvi00710 Carbon fixation by Calvin cycle 5
vvi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 7
ppo01200 Carbon metabolism 5
ppo00190 Oxidative phosphorylation 4
ppo00230 Purine metabolism 3
ppo01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr04145 Phagosome 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr00190 Oxidative phosphorylation 4
mtr04145 Phagosome 4
mtr01230 Biosynthesis of amino acids 3
mtr04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 6
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
tae01212 Fatty acid metabolism 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 4
tae01200 Carbon metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00061 Fatty acid biosynthesis 3
tae00780 Biotin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 5
hvu01230 Biosynthesis of amino acids 4
hvu00030 Pentose phosphate pathway 3
hvu00480 Glutathione metabolism 3
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00480 Glutathione metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu04146 Peroxisome 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 4
ghi04146 Peroxisome 3
ghi00020 Citrate cycle (TCA cycle) 2
ghi00480 Glutathione metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 2
ghi00480 Glutathione metabolism 2
ghi01200 Carbon metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 7
bna01210 2-Oxocarboxylic acid metabolism 7
bna01230 Biosynthesis of amino acids 7
bna00020 Citrate cycle (TCA cycle) 6
bna00480 Glutathione metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre04146 Peroxisome 3
cre00020 Citrate cycle (TCA cycle) 3
cre01210 2-Oxocarboxylic acid metabolism 3
cre01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi00410 beta-Alanine metabolism 2
sbi00020 Citrate cycle (TCA cycle) 2
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 3
sbi01200 Carbon metabolism 3
sbi00020 Citrate cycle (TCA cycle) 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 9
sot00020 Citrate cycle (TCA cycle) 7
sot01210 2-Oxocarboxylic acid metabolism 6
sot01230 Biosynthesis of amino acids 6
sot00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 13
sot01210 2-Oxocarboxylic acid metabolism 9
sot01230 Biosynthesis of amino acids 8
sot00020 Citrate cycle (TCA cycle) 7
sot04146 Peroxisome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit00650 Butanoate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00380 Tryptophan metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi04146 Peroxisome 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04145 Phagosome 4
bdi04148 Efferocytosis 4
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta01240 Biosynthesis of cofactors 3
nta00860 Porphyrin metabolism 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta00020 Citrate cycle (TCA cycle) 3
nta00480 Glutathione metabolism 3
nta01200 Carbon metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831311 841875 100816688 606295 101268602 101255848 4327213 4324176 100217128 100274592 103852304 103831074 100243260 100249290 7468338 7487863 11445769 11419675 123078694 123053862 123443997 123427205 107888667 107920416 106381331 106353193 5724231 110433864 110430300 102591365 102578331 102618681 102629733 100837485 100837775 107801694 107768947
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